Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CtifQ6PEE2 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CtifQ6PEE2 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CtifQ6PEE2 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CtifQ6PEE2 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CtifQ6PEE2 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CtifQ6PEE2 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CtifQ6PEE2 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CtifQ6PEE2 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CtifQ6PEE2 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CtifQ6PEE2 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CtifQ6PEE2 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CtifQ6PEE2 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CtifQ6PEE2 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CtifQ6PEE2 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CtifQ6PEE2 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CtifQ6PEE2 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CtifQ6PEE2 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CtifQ6PEE2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CtifQ6PEE2 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CtifQ6PEE2 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CtifQ6PEE2 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.48□□□□□ -0.41
CtifQ6PEE2 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CtifQ6PEE2 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.48□□□□□ -0.41
CtifQ6PEE2 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.48□□□□□ -0.41
CtifQ6PEE2 Gm6114-201ENSMUST00000182472 968 ntBASIC12.48□□□□□ -0.41
CtifQ6PEE2 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.48□□□□□ -0.41
CtifQ6PEE2 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.48□□□□□ -0.41
CtifQ6PEE2 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.48□□□□□ -0.41
CtifQ6PEE2 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CtifQ6PEE2 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CtifQ6PEE2 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
CtifQ6PEE2 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CtifQ6PEE2 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CtifQ6PEE2 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CtifQ6PEE2 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CtifQ6PEE2 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CtifQ6PEE2 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CtifQ6PEE2 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CtifQ6PEE2 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CtifQ6PEE2 Ptpre-208ENSMUST00000211788 2331 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CtifQ6PEE2 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CtifQ6PEE2 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CtifQ6PEE2 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Gm38357-201ENSMUST00000195382 2464 ntBASIC12.47□□□□□ -0.41
CtifQ6PEE2 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.47□□□□□ -0.41
CtifQ6PEE2 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.47□□□□□ -0.41
CtifQ6PEE2 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Gm2231-201ENSMUST00000125661 612 ntBASIC12.47□□□□□ -0.41
CtifQ6PEE2 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CtifQ6PEE2 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CtifQ6PEE2 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.47□□□□□ -0.41
CtifQ6PEE2 Gm5370-201ENSMUST00000187187 574 ntBASIC12.47□□□□□ -0.41
CtifQ6PEE2 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.47□□□□□ -0.41
CtifQ6PEE2 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Gm18711-201ENSMUST00000199341 750 ntBASIC12.47□□□□□ -0.41
CtifQ6PEE2 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.47□□□□□ -0.41
CtifQ6PEE2 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtifQ6PEE2 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.47□□□□□ -0.41
CtifQ6PEE2 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.47□□□□□ -0.41
CtifQ6PEE2 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtifQ6PEE2 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CtifQ6PEE2 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC12.46□□□□□ -0.41
CtifQ6PEE2 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CtifQ6PEE2 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CtifQ6PEE2 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CtifQ6PEE2 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CtifQ6PEE2 Gm43372-201ENSMUST00000202662 3016 ntBASIC12.46□□□□□ -0.41
CtifQ6PEE2 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CtifQ6PEE2 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms