Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chd4Q6PDQ2 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Chd4Q6PDQ2 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.04■□□□□ -0
Chd4Q6PDQ2 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd4Q6PDQ2 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Chd4Q6PDQ2 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC15.04■□□□□ -0
Chd4Q6PDQ2 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC15.04■□□□□ -0
Chd4Q6PDQ2 AC159376.1-201ENSMUST00000218504 630 ntBASIC15.04■□□□□ -0
Chd4Q6PDQ2 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC15.04■□□□□ -0
Chd4Q6PDQ2 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd4Q6PDQ2 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd4Q6PDQ2 Gm7104-201ENSMUST00000179741 2532 ntBASIC15.04■□□□□ -0
Chd4Q6PDQ2 AC174797.1-201ENSMUST00000224339 1649 ntBASIC15.04■□□□□ -0
Chd4Q6PDQ2 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Chd4Q6PDQ2 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chd4Q6PDQ2 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chd4Q6PDQ2 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Chd4Q6PDQ2 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Chd4Q6PDQ2 Gm33366-201ENSMUST00000195583 3827 ntBASIC15.04■□□□□ -0
Chd4Q6PDQ2 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chd4Q6PDQ2 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd4Q6PDQ2 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd4Q6PDQ2 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Chd4Q6PDQ2 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Chd4Q6PDQ2 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Chd4Q6PDQ2 Mir453-201ENSMUST00000104732 82 ntBASIC15.04■□□□□ -0
Chd4Q6PDQ2 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Chd4Q6PDQ2 Gm13039-201ENSMUST00000118638 794 ntBASIC15.04■□□□□ -0
Chd4Q6PDQ2 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC15.04■□□□□ -0
Chd4Q6PDQ2 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC15.04■□□□□ -0
Chd4Q6PDQ2 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Chd4Q6PDQ2 Gm19013-201ENSMUST00000183895 1222 ntBASIC15.04■□□□□ -0
Chd4Q6PDQ2 Gm19014-201ENSMUST00000184828 1189 ntBASIC15.04■□□□□ -0
Chd4Q6PDQ2 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Chd4Q6PDQ2 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Chd4Q6PDQ2 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Chd4Q6PDQ2 Gm18499-201ENSMUST00000220808 1021 ntBASIC15.04■□□□□ -0
Chd4Q6PDQ2 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC15.04■□□□□ -0
Chd4Q6PDQ2 AC115304.2-201ENSMUST00000226399 332 ntBASIC15.04■□□□□ -0
Chd4Q6PDQ2 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC15.04■□□□□ -0
Chd4Q6PDQ2 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC15.04■□□□□ -0
Chd4Q6PDQ2 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Chd4Q6PDQ2 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chd4Q6PDQ2 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Chd4Q6PDQ2 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Chd4Q6PDQ2 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd4Q6PDQ2 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Chd4Q6PDQ2 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chd4Q6PDQ2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd4Q6PDQ2 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chd4Q6PDQ2 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Chd4Q6PDQ2 Adgrv1-214ENSMUST00000224088 1492 ntBASIC15.03■□□□□ -0
Chd4Q6PDQ2 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chd4Q6PDQ2 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Chd4Q6PDQ2 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Chd4Q6PDQ2 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd4Q6PDQ2 Gm9916-201ENSMUST00000192943 1228 ntBASIC15.03■□□□□ -0
Chd4Q6PDQ2 Gm43506-201ENSMUST00000200675 753 ntBASIC15.03■□□□□ -0
Chd4Q6PDQ2 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chd4Q6PDQ2 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chd4Q6PDQ2 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.03■□□□□ -0
Chd4Q6PDQ2 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC15.03■□□□□ -0
Chd4Q6PDQ2 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Chd4Q6PDQ2 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd4Q6PDQ2 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Chd4Q6PDQ2 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chd4Q6PDQ2 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chd4Q6PDQ2 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chd4Q6PDQ2 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC15.02■□□□□ -0
Chd4Q6PDQ2 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Chd4Q6PDQ2 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC15.02■□□□□ -0
Chd4Q6PDQ2 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chd4Q6PDQ2 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Chd4Q6PDQ2 AC124397.2-201ENSMUST00000225575 2215 ntBASIC15.02■□□□□ -0
Chd4Q6PDQ2 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chd4Q6PDQ2 Gm16459-201ENSMUST00000121443 686 ntBASIC15.02■□□□□ -0
Chd4Q6PDQ2 Gm9507-202ENSMUST00000180157 654 ntBASIC15.02■□□□□ -0
Chd4Q6PDQ2 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Chd4Q6PDQ2 AC162932.1-201ENSMUST00000219209 872 ntBASIC15.02■□□□□ -0
Chd4Q6PDQ2 AC153962.2-201ENSMUST00000219417 550 ntBASIC15.02■□□□□ -0
Chd4Q6PDQ2 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC15.02■□□□□ -0
Chd4Q6PDQ2 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC15.02■□□□□ -0
Chd4Q6PDQ2 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC15.02■□□□□ -0
Chd4Q6PDQ2 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
Chd4Q6PDQ2 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chd4Q6PDQ2 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
Chd4Q6PDQ2 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chd4Q6PDQ2 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Chd4Q6PDQ2 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chd4Q6PDQ2 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC15.02□□□□□ -0.01
Chd4Q6PDQ2 Gm14005-210ENSMUST00000225087 1413 ntBASIC15.02□□□□□ -0.01
Chd4Q6PDQ2 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chd4Q6PDQ2 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chd4Q6PDQ2 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Chd4Q6PDQ2 Gm25569-201ENSMUST00000157175 131 ntBASIC15.02□□□□□ -0.01
Chd4Q6PDQ2 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Chd4Q6PDQ2 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Chd4Q6PDQ2 Gm5870-201ENSMUST00000196461 282 ntBASIC15.02□□□□□ -0.01
Chd4Q6PDQ2 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC15.02□□□□□ -0.01
Chd4Q6PDQ2 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms