Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Gm21769-201ENSMUST00000211922 111 ntBASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Krt39Q6IFX4 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Gm23270-201ENSMUST00000104055 131 ntBASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Gm14381-201ENSMUST00000122105 414 ntBASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.94□□□□□ -0.34
Krt39Q6IFX4 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.94□□□□□ -0.34
Krt39Q6IFX4 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt39Q6IFX4 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Krt39Q6IFX4 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Gm15547-201ENSMUST00000122152 333 ntBASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Gm5070-201ENSMUST00000177599 862 ntBASIC12.93□□□□□ -0.34
Krt39Q6IFX4 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Gm31256-201ENSMUST00000194705 506 ntBASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Gm19287-201ENSMUST00000203190 358 ntBASIC12.93□□□□□ -0.34
Krt39Q6IFX4 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.93□□□□□ -0.34
Krt39Q6IFX4 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms