Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC15.41■□□□□ 0.06
Gli3Q61602 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gli3Q61602 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC15.41■□□□□ 0.06
Gli3Q61602 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Gli3Q61602 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC15.41■□□□□ 0.06
Gli3Q61602 AC163646.3-202ENSMUST00000228685 691 ntBASIC15.41■□□□□ 0.06
Gli3Q61602 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
Gli3Q61602 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gli3Q61602 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Gli3Q61602 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.4■□□□□ 0.06
Gli3Q61602 Gm38385-201ENSMUST00000194454 2351 ntBASIC15.4■□□□□ 0.06
Gli3Q61602 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gli3Q61602 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gli3Q61602 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gli3Q61602 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gli3Q61602 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gli3Q61602 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Gli3Q61602 Gm15793-201ENSMUST00000121857 495 ntBASIC15.4■□□□□ 0.06
Gli3Q61602 Gm16288-201ENSMUST00000137940 367 ntBASIC15.4■□□□□ 0.06
Gli3Q61602 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC15.4■□□□□ 0.06
Gli3Q61602 Gm9574-201ENSMUST00000173127 845 ntBASIC15.4■□□□□ 0.06
Gli3Q61602 Gm8707-201ENSMUST00000183325 980 ntBASIC15.4■□□□□ 0.06
Gli3Q61602 Gm5311-201ENSMUST00000203518 709 ntBASIC15.4■□□□□ 0.06
Gli3Q61602 AC107711.3-201ENSMUST00000228939 1035 ntBASIC15.4■□□□□ 0.06
Gli3Q61602 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gli3Q61602 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gli3Q61602 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gli3Q61602 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gli3Q61602 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Gli3Q61602 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gli3Q61602 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gli3Q61602 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gli3Q61602 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gli3Q61602 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gli3Q61602 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Gli3Q61602 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gli3Q61602 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Gli3Q61602 Mir704-201ENSMUST00000102106 77 ntBASIC15.39■□□□□ 0.05
Gli3Q61602 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
Gli3Q61602 Gm6276-201ENSMUST00000120159 579 ntBASIC15.39■□□□□ 0.05
Gli3Q61602 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC15.39■□□□□ 0.05
Gli3Q61602 Snord55-201ENSMUST00000174939 79 ntBASIC15.39■□□□□ 0.05
Gli3Q61602 Gm27833-201ENSMUST00000184285 124 ntBASIC15.39■□□□□ 0.05
Gli3Q61602 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Gli3Q61602 Gm7642-201ENSMUST00000216345 1809 ntBASIC15.39■□□□□ 0.05
Gli3Q61602 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC15.39■□□□□ 0.05
Gli3Q61602 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gli3Q61602 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Gli3Q61602 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gli3Q61602 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Gli3Q61602 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gli3Q61602 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gli3Q61602 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Gli3Q61602 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gli3Q61602 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Gli3Q61602 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Gli3Q61602 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC15.39■□□□□ 0.05
Gli3Q61602 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gli3Q61602 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gli3Q61602 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Gli3Q61602 Rnf216-209ENSMUST00000200607 3704 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Gli3Q61602 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Gli3Q61602 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Gli3Q61602 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Gli3Q61602 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC15.38■□□□□ 0.05
Gli3Q61602 Mir8111-201ENSMUST00000184463 137 ntBASIC15.38■□□□□ 0.05
Gli3Q61602 Gm32102-201ENSMUST00000196885 241 ntBASIC15.38■□□□□ 0.05
Gli3Q61602 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Gli3Q61602 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Gli3Q61602 Gm18065-201ENSMUST00000221395 526 ntBASIC15.38■□□□□ 0.05
Gli3Q61602 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Gli3Q61602 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Gli3Q61602 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Gli3Q61602 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Gli3Q61602 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Gli3Q61602 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Gli3Q61602 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Gli3Q61602 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Gli3Q61602 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Gli3Q61602 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Gli3Q61602 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Gli3Q61602 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Gli3Q61602 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Gli3Q61602 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Gli3Q61602 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Gli3Q61602 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gli3Q61602 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gli3Q61602 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC15.37■□□□□ 0.05
Gli3Q61602 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Gli3Q61602 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.37■□□□□ 0.05
Gli3Q61602 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Gli3Q61602 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Gli3Q61602 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC15.37■□□□□ 0.05
Gli3Q61602 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Gli3Q61602 Gm29595-202ENSMUST00000187954 466 ntTSL 3 BASIC15.37■□□□□ 0.05
Gli3Q61602 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Gli3Q61602 Gm43103-201ENSMUST00000199021 802 ntBASIC15.37■□□□□ 0.05
Gli3Q61602 AC159196.1-201ENSMUST00000225524 377 ntBASIC15.37■□□□□ 0.05
Gli3Q61602 AC164978.2-201ENSMUST00000226645 857 ntBASIC15.37■□□□□ 0.05
Gli3Q61602 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms