Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm13201-201ENSMUST00000144031 600 ntTSL 3 BASIC11.27□□□□□ -0.61
Col12a1Q60847 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC11.27□□□□□ -0.61
Col12a1Q60847 Gm43460-201ENSMUST00000202491 1057 ntBASIC11.27□□□□□ -0.61
Col12a1Q60847 Gm18621-201ENSMUST00000222677 679 ntBASIC11.27□□□□□ -0.61
Col12a1Q60847 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col12a1Q60847 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC11.27□□□□□ -0.61
Col12a1Q60847 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Col12a1Q60847 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col12a1Q60847 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.61
Col12a1Q60847 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col12a1Q60847 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col12a1Q60847 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col12a1Q60847 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Col12a1Q60847 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.27□□□□□ -0.61
Col12a1Q60847 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col12a1Q60847 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Col12a1Q60847 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Col12a1Q60847 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col12a1Q60847 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col12a1Q60847 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col12a1Q60847 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col12a1Q60847 Gm37582-201ENSMUST00000192953 1409 ntBASIC11.27□□□□□ -0.61
Col12a1Q60847 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Col12a1Q60847 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col12a1Q60847 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col12a1Q60847 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC11.26□□□□□ -0.61
Col12a1Q60847 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col12a1Q60847 CT010505.2-201ENSMUST00000227918 998 ntBASIC11.26□□□□□ -0.61
Col12a1Q60847 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Col12a1Q60847 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Col12a1Q60847 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col12a1Q60847 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col12a1Q60847 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col12a1Q60847 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col12a1Q60847 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col12a1Q60847 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col12a1Q60847 Fam220-ps-201ENSMUST00000116535 783 ntBASIC11.26□□□□□ -0.61
Col12a1Q60847 Gm16219-201ENSMUST00000120096 274 ntBASIC11.26□□□□□ -0.61
Col12a1Q60847 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Col12a1Q60847 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col12a1Q60847 Gm44304-201ENSMUST00000200509 145 ntBASIC11.26□□□□□ -0.61
Col12a1Q60847 AC164614.1-201ENSMUST00000216038 397 ntBASIC11.26□□□□□ -0.61
Col12a1Q60847 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col12a1Q60847 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.26□□□□□ -0.61
Col12a1Q60847 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col12a1Q60847 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col12a1Q60847 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.26□□□□□ -0.61
Col12a1Q60847 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Col12a1Q60847 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC11.26□□□□□ -0.61
Col12a1Q60847 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col12a1Q60847 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col12a1Q60847 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col12a1Q60847 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.26□□□□□ -0.61
Col12a1Q60847 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col12a1Q60847 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col12a1Q60847 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col12a1Q60847 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col12a1Q60847 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col12a1Q60847 Gm12028-201ENSMUST00000118065 436 ntBASIC11.26□□□□□ -0.61
Col12a1Q60847 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC11.26□□□□□ -0.61
Col12a1Q60847 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC11.26□□□□□ -0.61
Col12a1Q60847 Gm28671-201ENSMUST00000187036 692 ntBASIC11.26□□□□□ -0.61
Col12a1Q60847 Gm29067-201ENSMUST00000190821 470 ntBASIC11.26□□□□□ -0.61
Col12a1Q60847 Gm38145-201ENSMUST00000192319 693 ntBASIC11.26□□□□□ -0.61
Col12a1Q60847 Gm45893-201ENSMUST00000211899 247 ntBASIC11.26□□□□□ -0.61
Col12a1Q60847 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC11.26□□□□□ -0.61
Col12a1Q60847 AC163638.2-201ENSMUST00000224920 827 ntBASIC11.26□□□□□ -0.61
Col12a1Q60847 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Col12a1Q60847 Gm38192-201ENSMUST00000194364 1847 ntBASIC11.26□□□□□ -0.61
Col12a1Q60847 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col12a1Q60847 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col12a1Q60847 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.26□□□□□ -0.61
Col12a1Q60847 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Col12a1Q60847 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col12a1Q60847 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Col12a1Q60847 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col12a1Q60847 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col12a1Q60847 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Col12a1Q60847 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col12a1Q60847 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col12a1Q60847 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.25□□□□□ -0.61
Col12a1Q60847 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col12a1Q60847 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.25□□□□□ -0.61
Col12a1Q60847 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col12a1Q60847 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col12a1Q60847 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Col12a1Q60847 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Col12a1Q60847 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col12a1Q60847 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC11.25□□□□□ -0.61
Col12a1Q60847 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col12a1Q60847 Gm12435-201ENSMUST00000118949 1016 ntBASIC11.25□□□□□ -0.61
Col12a1Q60847 Gm15636-201ENSMUST00000119205 668 ntBASIC11.25□□□□□ -0.61
Col12a1Q60847 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.25□□□□□ -0.61
Col12a1Q60847 Gm2566-201ENSMUST00000201267 431 ntBASIC11.25□□□□□ -0.61
Col12a1Q60847 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC11.25□□□□□ -0.61
Col12a1Q60847 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col12a1Q60847 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col12a1Q60847 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col12a1Q60847 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Col12a1Q60847 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms