Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf20Q5DTM8 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf20Q5DTM8 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf20Q5DTM8 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf20Q5DTM8 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf20Q5DTM8 Gm9072-201ENSMUST00000218390 1514 ntBASIC13.98□□□□□ -0.17
Rnf20Q5DTM8 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf20Q5DTM8 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Rnf20Q5DTM8 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Rnf20Q5DTM8 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Rnf20Q5DTM8 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf20Q5DTM8 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf20Q5DTM8 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rnf20Q5DTM8 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Gm23949-201ENSMUST00000104027 127 ntBASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Gm6548-201ENSMUST00000167498 1165 ntBASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Gm28937-201ENSMUST00000185413 695 ntBASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Gm29400-201ENSMUST00000187208 695 ntBASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Gm28662-201ENSMUST00000188446 695 ntBASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Gm28251-201ENSMUST00000188835 695 ntBASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Gm37318-201ENSMUST00000194325 695 ntBASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Gm38017-201ENSMUST00000194768 695 ntBASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Gm37287-201ENSMUST00000195449 695 ntBASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Gm37793-201ENSMUST00000195548 695 ntBASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Gm43002-201ENSMUST00000200310 155 ntBASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Gm7841-201ENSMUST00000122108 1629 ntBASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rnf20Q5DTM8 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf20Q5DTM8 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf20Q5DTM8 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf20Q5DTM8 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf20Q5DTM8 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC13.96□□□□□ -0.17
Rnf20Q5DTM8 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf20Q5DTM8 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf20Q5DTM8 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf20Q5DTM8 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf20Q5DTM8 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf20Q5DTM8 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Rnf20Q5DTM8 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.96□□□□□ -0.17
Rnf20Q5DTM8 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.96□□□□□ -0.17
Rnf20Q5DTM8 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.96□□□□□ -0.17
Rnf20Q5DTM8 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Rnf20Q5DTM8 Gm4310-201ENSMUST00000177847 889 ntBASIC13.96□□□□□ -0.17
Rnf20Q5DTM8 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf20Q5DTM8 Gm807-202ENSMUST00000224929 408 ntBASIC13.96□□□□□ -0.17
Rnf20Q5DTM8 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf20Q5DTM8 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf20Q5DTM8 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rnf20Q5DTM8 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
Rnf20Q5DTM8 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Rnf20Q5DTM8 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Rnf20Q5DTM8 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
Rnf20Q5DTM8 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf20Q5DTM8 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf20Q5DTM8 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf20Q5DTM8 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Rnf20Q5DTM8 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf20Q5DTM8 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf20Q5DTM8 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf20Q5DTM8 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf20Q5DTM8 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf20Q5DTM8 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Rnf20Q5DTM8 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.95□□□□□ -0.18
Rnf20Q5DTM8 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf20Q5DTM8 Gm15711-201ENSMUST00000118889 535 ntBASIC13.95□□□□□ -0.18
Rnf20Q5DTM8 Gm12380-201ENSMUST00000119012 544 ntBASIC13.95□□□□□ -0.18
Rnf20Q5DTM8 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.95□□□□□ -0.18
Rnf20Q5DTM8 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Rnf20Q5DTM8 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.95□□□□□ -0.18
Rnf20Q5DTM8 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms