Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.99□□□□□ -0.65
Trim40Q3UWA4 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim40Q3UWA4 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim40Q3UWA4 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim40Q3UWA4 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim40Q3UWA4 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Trim40Q3UWA4 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim40Q3UWA4 Gm8793-201ENSMUST00000183069 1303 ntBASIC10.99□□□□□ -0.65
Trim40Q3UWA4 Gm5620-201ENSMUST00000077991 1348 ntBASIC10.99□□□□□ -0.65
Trim40Q3UWA4 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim40Q3UWA4 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim40Q3UWA4 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
Trim40Q3UWA4 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.99□□□□□ -0.65
Trim40Q3UWA4 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim40Q3UWA4 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim40Q3UWA4 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim40Q3UWA4 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.99□□□□□ -0.65
Trim40Q3UWA4 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trim40Q3UWA4 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim40Q3UWA4 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim40Q3UWA4 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trim40Q3UWA4 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Trim40Q3UWA4 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.99□□□□□ -0.65
Trim40Q3UWA4 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Gm38241-201ENSMUST00000192641 898 ntBASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Gm43579-201ENSMUST00000202387 1307 ntBASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Trim40Q3UWA4 AC123738.2-201ENSMUST00000223791 1899 ntBASIC10.98□□□□□ -0.65
Trim40Q3UWA4 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.97□□□□□ -0.65
Trim40Q3UWA4 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Gm8738-201ENSMUST00000172606 329 ntBASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.97□□□□□ -0.65
Trim40Q3UWA4 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms