Protein–RNA interactions for Protein: Q3U595

UPF0545 protein C22orf39 homolog, mousemouse

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U595 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Q3U595 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Q3U595 Gm5847-201ENSMUST00000178959 1595 ntBASIC9.75□□□□□ -0.85
Q3U595 Gm45496-201ENSMUST00000209918 2917 ntBASIC9.75□□□□□ -0.85
Q3U595 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Q3U595 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Q3U595 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Q3U595 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Q3U595 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Q3U595 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Q3U595 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Q3U595 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Q3U595 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Q3U595 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Q3U595 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Q3U595 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Q3U595 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Q3U595 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Q3U595 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Q3U595 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Q3U595 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Q3U595 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
Q3U595 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Q3U595 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Q3U595 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC9.74□□□□□ -0.85
Q3U595 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC9.74□□□□□ -0.85
Q3U595 Gm36987-201ENSMUST00000194704 2979 ntBASIC9.74□□□□□ -0.85
Q3U595 Erich3-203ENSMUST00000189969 3460 ntBASIC9.74□□□□□ -0.85
Q3U595 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Q3U595 Gm13829-201ENSMUST00000119600 138 ntBASIC9.74□□□□□ -0.85
Q3U595 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC9.74□□□□□ -0.85
Q3U595 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Q3U595 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Q3U595 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC9.74□□□□□ -0.85
Q3U595 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Q3U595 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Q3U595 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Q3U595 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC9.74□□□□□ -0.85
Q3U595 Gm26956-201ENSMUST00000182176 986 ntBASIC9.74□□□□□ -0.85
Q3U595 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC9.74□□□□□ -0.85
Q3U595 Gm9728-201ENSMUST00000200197 1055 ntBASIC9.74□□□□□ -0.85
Q3U595 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Q3U595 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
Q3U595 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Q3U595 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Q3U595 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Q3U595 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Q3U595 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Q3U595 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Q3U595 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Q3U595 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Q3U595 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC9.74□□□□□ -0.85
Q3U595 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Q3U595 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Q3U595 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Q3U595 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Q3U595 Gm7964-201ENSMUST00000051522 1378 ntBASIC9.74□□□□□ -0.85
Q3U595 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Q3U595 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Q3U595 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Q3U595 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Q3U595 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Q3U595 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Q3U595 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Q3U595 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Q3U595 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Q3U595 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC9.73□□□□□ -0.85
Q3U595 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Q3U595 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Q3U595 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Q3U595 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Q3U595 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC9.73□□□□□ -0.85
Q3U595 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Q3U595 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC9.73□□□□□ -0.85
Q3U595 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Q3U595 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Q3U595 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Q3U595 Gm44755-201ENSMUST00000207830 2102 ntBASIC9.73□□□□□ -0.85
Q3U595 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Q3U595 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Q3U595 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Q3U595 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Q3U595 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
Q3U595 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Q3U595 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.85
Q3U595 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Q3U595 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Q3U595 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Q3U595 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Q3U595 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Q3U595 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Q3U595 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Q3U595 Gm23931-201ENSMUST00000103842 109 ntBASIC9.73□□□□□ -0.85
Q3U595 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC9.73□□□□□ -0.85
Q3U595 Gm11793-201ENSMUST00000120433 981 ntBASIC9.73□□□□□ -0.85
Q3U595 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Q3U595 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Q3U595 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Q3U595 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC9.73□□□□□ -0.85
Q3U595 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms