Protein–RNA interactions for Protein: Q3TIR1

Trappc13, Trafficking protein particle complex subunit 13, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc13Q3TIR1 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 Mir8109-201ENSMUST00000184375 117 ntBASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 Gm7895-201ENSMUST00000187459 1173 ntBASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 Gm2553-201ENSMUST00000215986 605 ntBASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trappc13Q3TIR1 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Gm5705-201ENSMUST00000066241 711 ntBASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.91□□□□□ -0.66
Trappc13Q3TIR1 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trappc13Q3TIR1 Gm42853-201ENSMUST00000201273 1387 ntBASIC10.9□□□□□ -0.66
Trappc13Q3TIR1 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.9□□□□□ -0.66
Trappc13Q3TIR1 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trappc13Q3TIR1 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trappc13Q3TIR1 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trappc13Q3TIR1 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.9□□□□□ -0.66
Trappc13Q3TIR1 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.9□□□□□ -0.66
Trappc13Q3TIR1 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trappc13Q3TIR1 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trappc13Q3TIR1 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trappc13Q3TIR1 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trappc13Q3TIR1 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.9□□□□□ -0.66
Trappc13Q3TIR1 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trappc13Q3TIR1 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trappc13Q3TIR1 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trappc13Q3TIR1 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trappc13Q3TIR1 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.9□□□□□ -0.66
Trappc13Q3TIR1 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trappc13Q3TIR1 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trappc13Q3TIR1 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trappc13Q3TIR1 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.9□□□□□ -0.66
Trappc13Q3TIR1 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms