Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC11.9□□□□□ -0.5
Col9a1Q05722 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a1Q05722 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a1Q05722 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.5
Col9a1Q05722 Gm38195-201ENSMUST00000194247 1499 ntBASIC11.9□□□□□ -0.5
Col9a1Q05722 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Col9a1Q05722 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a1Q05722 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.9□□□□□ -0.5
Col9a1Q05722 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a1Q05722 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Col9a1Q05722 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a1Q05722 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a1Q05722 Gm12579-201ENSMUST00000118040 783 ntBASIC11.9□□□□□ -0.5
Col9a1Q05722 Gm12179-201ENSMUST00000118344 1272 ntBASIC11.9□□□□□ -0.5
Col9a1Q05722 Gm6322-201ENSMUST00000118789 1004 ntBASIC11.9□□□□□ -0.5
Col9a1Q05722 Gm12274-201ENSMUST00000120062 385 ntBASIC11.9□□□□□ -0.5
Col9a1Q05722 Gm12383-201ENSMUST00000120628 760 ntBASIC11.9□□□□□ -0.5
Col9a1Q05722 Gm14713-201ENSMUST00000122362 686 ntBASIC11.9□□□□□ -0.5
Col9a1Q05722 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a1Q05722 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a1Q05722 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC11.9□□□□□ -0.5
Col9a1Q05722 Gm27826-201ENSMUST00000175282 255 ntBASIC11.9□□□□□ -0.5
Col9a1Q05722 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Col9a1Q05722 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.5
Col9a1Q05722 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a1Q05722 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Col9a1Q05722 Gm18561-201ENSMUST00000206027 804 ntBASIC11.9□□□□□ -0.5
Col9a1Q05722 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC11.9□□□□□ -0.5
Col9a1Q05722 Gm18255-201ENSMUST00000211316 765 ntBASIC11.9□□□□□ -0.5
Col9a1Q05722 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC11.9□□□□□ -0.5
Col9a1Q05722 AC159476.2-201ENSMUST00000216221 418 ntBASIC11.9□□□□□ -0.5
Col9a1Q05722 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.9□□□□□ -0.5
Col9a1Q05722 AC107752.1-201ENSMUST00000219362 469 ntBASIC11.9□□□□□ -0.5
Col9a1Q05722 AC164629.1-201ENSMUST00000220250 1113 ntBASIC11.9□□□□□ -0.5
Col9a1Q05722 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC11.9□□□□□ -0.5
Col9a1Q05722 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.9□□□□□ -0.5
Col9a1Q05722 AV026068-225ENSMUST00000225042 490 ntBASIC11.9□□□□□ -0.5
Col9a1Q05722 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a1Q05722 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Col9a1Q05722 Olfr452-201ENSMUST00000075468 954 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Col9a1Q05722 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a1Q05722 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Col9a1Q05722 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Col9a1Q05722 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a1Q05722 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a1Q05722 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a1Q05722 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a1Q05722 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a1Q05722 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a1Q05722 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a1Q05722 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a1Q05722 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Col9a1Q05722 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.9□□□□□ -0.51
Col9a1Q05722 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Col9a1Q05722 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Col9a1Q05722 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Col9a1Q05722 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Col9a1Q05722 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Col9a1Q05722 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col9a1Q05722 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col9a1Q05722 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col9a1Q05722 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col9a1Q05722 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col9a1Q05722 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col9a1Q05722 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.89□□□□□ -0.51
Col9a1Q05722 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col9a1Q05722 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col9a1Q05722 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col9a1Q05722 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col9a1Q05722 Gm22711-201ENSMUST00000116890 133 ntBASIC11.89□□□□□ -0.51
Col9a1Q05722 Mir1190-201ENSMUST00000116925 96 ntBASIC11.89□□□□□ -0.51
Col9a1Q05722 Gm12584-201ENSMUST00000117109 1105 ntBASIC11.89□□□□□ -0.51
Col9a1Q05722 Gm13039-201ENSMUST00000118638 794 ntBASIC11.89□□□□□ -0.51
Col9a1Q05722 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.89□□□□□ -0.51
Col9a1Q05722 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC11.89□□□□□ -0.51
Col9a1Q05722 Gm13827-201ENSMUST00000148801 372 ntBASIC11.89□□□□□ -0.51
Col9a1Q05722 Gm26174-201ENSMUST00000158415 219 ntBASIC11.89□□□□□ -0.51
Col9a1Q05722 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Col9a1Q05722 Gm16228-201ENSMUST00000162286 809 ntBASIC11.89□□□□□ -0.51
Col9a1Q05722 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.89□□□□□ -0.51
Col9a1Q05722 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC11.89□□□□□ -0.51
Col9a1Q05722 Gm5251-201ENSMUST00000188959 472 ntBASIC11.89□□□□□ -0.51
Col9a1Q05722 Ighv5-8-202ENSMUST00000191967 337 ntBASIC11.89□□□□□ -0.51
Col9a1Q05722 Gm18547-201ENSMUST00000192439 811 ntBASIC11.89□□□□□ -0.51
Col9a1Q05722 Gm44636-201ENSMUST00000206130 755 ntBASIC11.89□□□□□ -0.51
Col9a1Q05722 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC11.89□□□□□ -0.51
Col9a1Q05722 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.89□□□□□ -0.51
Col9a1Q05722 AC110816.1-201ENSMUST00000218559 980 ntBASIC11.89□□□□□ -0.51
Col9a1Q05722 Gm19095-201ENSMUST00000220533 730 ntBASIC11.89□□□□□ -0.51
Col9a1Q05722 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.89□□□□□ -0.51
Col9a1Q05722 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col9a1Q05722 AC132881.1-201ENSMUST00000223780 1062 ntBASIC11.89□□□□□ -0.51
Col9a1Q05722 CT025689.1-201ENSMUST00000225214 283 ntBASIC11.89□□□□□ -0.51
Col9a1Q05722 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Col9a1Q05722 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col9a1Q05722 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col9a1Q05722 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Col9a1Q05722 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col9a1Q05722 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col9a1Q05722 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms