Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sox9Q04887 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Gm13700-201ENSMUST00000118624 1128 ntBASIC12.16□□□□□ -0.46
Sox9Q04887 Gm14234-201ENSMUST00000119539 845 ntBASIC12.16□□□□□ -0.46
Sox9Q04887 Mir1905-201ENSMUST00000122779 82 ntBASIC12.16□□□□□ -0.46
Sox9Q04887 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Gm8459-201ENSMUST00000162504 760 ntBASIC12.16□□□□□ -0.46
Sox9Q04887 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Gm24954-201ENSMUST00000178831 110 ntBASIC12.16□□□□□ -0.46
Sox9Q04887 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Gm8756-201ENSMUST00000183250 929 ntBASIC12.16□□□□□ -0.46
Sox9Q04887 Gm43163-201ENSMUST00000196571 442 ntBASIC12.16□□□□□ -0.46
Sox9Q04887 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC12.16□□□□□ -0.46
Sox9Q04887 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.16□□□□□ -0.46
Sox9Q04887 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sox9Q04887 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox9Q04887 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox9Q04887 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Sox9Q04887 AC137950.2-202ENSMUST00000227150 1635 ntBASIC12.15□□□□□ -0.46
Sox9Q04887 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.15□□□□□ -0.46
Sox9Q04887 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox9Q04887 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox9Q04887 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox9Q04887 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox9Q04887 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.15□□□□□ -0.46
Sox9Q04887 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.15□□□□□ -0.46
Sox9Q04887 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox9Q04887 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox9Q04887 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox9Q04887 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox9Q04887 Gm15610-201ENSMUST00000120584 195 ntBASIC12.15□□□□□ -0.46
Sox9Q04887 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC12.15□□□□□ -0.46
Sox9Q04887 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox9Q04887 Gm24943-201ENSMUST00000158329 433 ntBASIC12.15□□□□□ -0.46
Sox9Q04887 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox9Q04887 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.15□□□□□ -0.46
Sox9Q04887 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC12.15□□□□□ -0.46
Sox9Q04887 Gm43547-201ENSMUST00000197729 328 ntBASIC12.15□□□□□ -0.46
Sox9Q04887 Gm44216-201ENSMUST00000203942 157 ntBASIC12.15□□□□□ -0.46
Sox9Q04887 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox9Q04887 Gm45094-201ENSMUST00000207013 617 ntBASIC12.15□□□□□ -0.46
Sox9Q04887 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.15□□□□□ -0.46
Sox9Q04887 Gm7940-201ENSMUST00000218195 769 ntBASIC12.15□□□□□ -0.46
Sox9Q04887 Gm9791-201ENSMUST00000060997 447 ntBASIC12.15□□□□□ -0.46
Sox9Q04887 Mir326-201ENSMUST00000083637 95 ntBASIC12.15□□□□□ -0.46
Sox9Q04887 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox9Q04887 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox9Q04887 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sox9Q04887 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Sox9Q04887 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox9Q04887 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.15□□□□□ -0.46
Sox9Q04887 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox9Q04887 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox9Q04887 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox9Q04887 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Sox9Q04887 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sox9Q04887 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sox9Q04887 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sox9Q04887 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Sox9Q04887 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sox9Q04887 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox9Q04887 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox9Q04887 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox9Q04887 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox9Q04887 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox9Q04887 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.14□□□□□ -0.47
Sox9Q04887 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox9Q04887 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox9Q04887 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sox9Q04887 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox9Q04887 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox9Q04887 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sox9Q04887 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox9Q04887 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox9Q04887 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox9Q04887 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox9Q04887 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.14□□□□□ -0.47
Sox9Q04887 Gm7741-201ENSMUST00000181445 989 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms