Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 AC164618.2-201ENSMUST00000224770 573 ntBASIC10.87□□□□□ -0.67
Cacna1aP97445 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Cacna1aP97445 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.87□□□□□ -0.67
Cacna1aP97445 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Cacna1aP97445 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cacna1aP97445 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC10.87□□□□□ -0.67
Cacna1aP97445 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Cacna1aP97445 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cacna1aP97445 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC10.87□□□□□ -0.67
Cacna1aP97445 Gm11502-201ENSMUST00000120917 1211 ntBASIC10.87□□□□□ -0.67
Cacna1aP97445 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.87□□□□□ -0.67
Cacna1aP97445 Gm24398-201ENSMUST00000157870 109 ntBASIC10.87□□□□□ -0.67
Cacna1aP97445 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 Gm4034-201ENSMUST00000187674 480 ntBASIC10.87□□□□□ -0.67
Cacna1aP97445 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cacna1aP97445 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC10.87□□□□□ -0.67
Cacna1aP97445 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Cacna1aP97445 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.87□□□□□ -0.67
Cacna1aP97445 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Cacna1aP97445 AC122346.3-201ENSMUST00000223983 306 ntBASIC10.87□□□□□ -0.67
Cacna1aP97445 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cacna1aP97445 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cacna1aP97445 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cacna1aP97445 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cacna1aP97445 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cacna1aP97445 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cacna1aP97445 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cacna1aP97445 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.86□□□□□ -0.67
Cacna1aP97445 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.86□□□□□ -0.67
Cacna1aP97445 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cacna1aP97445 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cacna1aP97445 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cacna1aP97445 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cacna1aP97445 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cacna1aP97445 Gm14892-201ENSMUST00000117636 267 ntBASIC10.86□□□□□ -0.67
Cacna1aP97445 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cacna1aP97445 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC10.86□□□□□ -0.67
Cacna1aP97445 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.86□□□□□ -0.67
Cacna1aP97445 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cacna1aP97445 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cacna1aP97445 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC10.86□□□□□ -0.67
Cacna1aP97445 Gm2553-201ENSMUST00000215986 605 ntBASIC10.86□□□□□ -0.67
Cacna1aP97445 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cacna1aP97445 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cacna1aP97445 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cacna1aP97445 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cacna1aP97445 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cacna1aP97445 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.86□□□□□ -0.67
Cacna1aP97445 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.86□□□□□ -0.67
Cacna1aP97445 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cacna1aP97445 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC10.85□□□□□ -0.67
Cacna1aP97445 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC10.85□□□□□ -0.67
Cacna1aP97445 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cacna1aP97445 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC10.85□□□□□ -0.67
Cacna1aP97445 Gm8436-201ENSMUST00000210152 1080 ntBASIC10.85□□□□□ -0.67
Cacna1aP97445 Gm5749-201ENSMUST00000210673 1090 ntBASIC10.85□□□□□ -0.67
Cacna1aP97445 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.85□□□□□ -0.67
Cacna1aP97445 Gm18514-201ENSMUST00000218980 436 ntBASIC10.85□□□□□ -0.67
Cacna1aP97445 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cacna1aP97445 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.85□□□□□ -0.67
Cacna1aP97445 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC10.85□□□□□ -0.67
Cacna1aP97445 Mir326-201ENSMUST00000083637 95 ntBASIC10.85□□□□□ -0.67
Cacna1aP97445 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Cacna1aP97445 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cacna1aP97445 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cacna1aP97445 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cacna1aP97445 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cacna1aP97445 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cacna1aP97445 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cacna1aP97445 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.85□□□□□ -0.67
Cacna1aP97445 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cacna1aP97445 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cacna1aP97445 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cacna1aP97445 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cacna1aP97445 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cacna1aP97445 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Cacna1aP97445 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cacna1aP97445 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cacna1aP97445 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cacna1aP97445 Gm13624-201ENSMUST00000120263 462 ntBASIC10.85□□□□□ -0.67
Cacna1aP97445 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms