Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43bP86448 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43bP86448 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43bP86448 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43bP86448 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trim43bP86448 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.1□□□□□ -0.47
Trim43bP86448 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43bP86448 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43bP86448 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim43bP86448 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43bP86448 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trim43bP86448 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trim43bP86448 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43bP86448 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43bP86448 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43bP86448 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43bP86448 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trim43bP86448 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43bP86448 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43bP86448 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trim43bP86448 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43bP86448 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43bP86448 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43bP86448 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
Trim43bP86448 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.09□□□□□ -0.47
Trim43bP86448 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43bP86448 Gm11439-201ENSMUST00000118598 409 ntBASIC12.09□□□□□ -0.47
Trim43bP86448 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.09□□□□□ -0.47
Trim43bP86448 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43bP86448 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43bP86448 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.09□□□□□ -0.47
Trim43bP86448 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43bP86448 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
Trim43bP86448 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43bP86448 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43bP86448 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.09□□□□□ -0.47
Trim43bP86448 AA914427-201ENSMUST00000193194 1166 ntBASIC12.09□□□□□ -0.47
Trim43bP86448 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43bP86448 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43bP86448 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.09□□□□□ -0.47
Trim43bP86448 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.09□□□□□ -0.47
Trim43bP86448 Gm8712-201ENSMUST00000221090 701 ntBASIC12.09□□□□□ -0.47
Trim43bP86448 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.09□□□□□ -0.47
Trim43bP86448 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43bP86448 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trim43bP86448 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43bP86448 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43bP86448 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43bP86448 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43bP86448 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.09□□□□□ -0.47
Trim43bP86448 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43bP86448 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43bP86448 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43bP86448 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43bP86448 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43bP86448 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43bP86448 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC12.09□□□□□ -0.47
Trim43bP86448 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trim43bP86448 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43bP86448 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim43bP86448 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trim43bP86448 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trim43bP86448 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43bP86448 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43bP86448 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43bP86448 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Trim43bP86448 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.08□□□□□ -0.48
Trim43bP86448 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trim43bP86448 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Trim43bP86448 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43bP86448 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.08□□□□□ -0.48
Trim43bP86448 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43bP86448 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43bP86448 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.08□□□□□ -0.48
Trim43bP86448 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43bP86448 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.08□□□□□ -0.48
Trim43bP86448 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43bP86448 Gm26361-201ENSMUST00000158868 186 ntBASIC12.08□□□□□ -0.48
Trim43bP86448 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43bP86448 Gm44651-201ENSMUST00000207343 372 ntBASIC12.08□□□□□ -0.48
Trim43bP86448 Gm5363-201ENSMUST00000211927 938 ntBASIC12.08□□□□□ -0.48
Trim43bP86448 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.08□□□□□ -0.48
Trim43bP86448 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.08□□□□□ -0.48
Trim43bP86448 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.08□□□□□ -0.48
Trim43bP86448 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43bP86448 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43bP86448 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43bP86448 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43bP86448 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43bP86448 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43bP86448 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trim43bP86448 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43bP86448 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43bP86448 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.08□□□□□ -0.48
Trim43bP86448 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trim43bP86448 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43bP86448 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43bP86448 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43bP86448 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43bP86448 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms