Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
SgcaP82350 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SgcaP82350 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
SgcaP82350 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SgcaP82350 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SgcaP82350 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
SgcaP82350 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
SgcaP82350 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
SgcaP82350 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SgcaP82350 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SgcaP82350 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SgcaP82350 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
SgcaP82350 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
SgcaP82350 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcaP82350 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcaP82350 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
SgcaP82350 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC9.83□□□□□ -0.84
SgcaP82350 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcaP82350 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcaP82350 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcaP82350 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcaP82350 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcaP82350 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcaP82350 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SgcaP82350 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcaP82350 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcaP82350 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcaP82350 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcaP82350 Gm3836-201ENSMUST00000211377 1613 ntBASIC9.83□□□□□ -0.84
SgcaP82350 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcaP82350 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcaP82350 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SgcaP82350 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC9.83□□□□□ -0.84
SgcaP82350 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SgcaP82350 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcaP82350 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC9.83□□□□□ -0.84
SgcaP82350 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC9.83□□□□□ -0.84
SgcaP82350 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SgcaP82350 Gm12091-201ENSMUST00000146791 830 ntBASIC9.83□□□□□ -0.84
SgcaP82350 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcaP82350 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
SgcaP82350 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC9.83□□□□□ -0.84
SgcaP82350 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SgcaP82350 Gm44405-201ENSMUST00000198952 126 ntBASIC9.83□□□□□ -0.84
SgcaP82350 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC9.83□□□□□ -0.84
SgcaP82350 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC9.83□□□□□ -0.84
SgcaP82350 Gm45925-201ENSMUST00000218882 744 ntBASIC9.83□□□□□ -0.84
SgcaP82350 CT010486.3-201ENSMUST00000224555 811 ntBASIC9.83□□□□□ -0.84
SgcaP82350 AC150560.1-201ENSMUST00000227731 1187 ntBASIC9.83□□□□□ -0.84
SgcaP82350 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcaP82350 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcaP82350 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC9.83□□□□□ -0.84
SgcaP82350 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SgcaP82350 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
SgcaP82350 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcaP82350 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcaP82350 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
SgcaP82350 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcaP82350 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC9.83□□□□□ -0.84
SgcaP82350 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SgcaP82350 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
SgcaP82350 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SgcaP82350 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC9.82□□□□□ -0.84
SgcaP82350 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC9.82□□□□□ -0.84
SgcaP82350 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcaP82350 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC9.82□□□□□ -0.84
SgcaP82350 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC9.82□□□□□ -0.84
SgcaP82350 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC9.82□□□□□ -0.84
SgcaP82350 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcaP82350 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcaP82350 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
SgcaP82350 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcaP82350 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SgcaP82350 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC9.82□□□□□ -0.84
SgcaP82350 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcaP82350 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcaP82350 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcaP82350 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcaP82350 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SgcaP82350 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC9.82□□□□□ -0.84
SgcaP82350 Gm13135-201ENSMUST00000117628 3121 ntBASIC9.82□□□□□ -0.84
SgcaP82350 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcaP82350 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
SgcaP82350 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SgcaP82350 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
SgcaP82350 Gm12314-201ENSMUST00000118104 538 ntBASIC9.82□□□□□ -0.84
SgcaP82350 Gm12502-201ENSMUST00000120197 444 ntBASIC9.82□□□□□ -0.84
SgcaP82350 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
SgcaP82350 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC9.82□□□□□ -0.84
SgcaP82350 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcaP82350 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC9.82□□□□□ -0.84
SgcaP82350 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SgcaP82350 Gm8515-201ENSMUST00000194852 576 ntBASIC9.82□□□□□ -0.84
SgcaP82350 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SgcaP82350 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SgcaP82350 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
SgcaP82350 AC125209.1-201ENSMUST00000225812 766 ntBASIC9.82□□□□□ -0.84
SgcaP82350 AC159006.1-201ENSMUST00000226396 258 ntBASIC9.82□□□□□ -0.84
SgcaP82350 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SgcaP82350 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms