Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pdlim4P70271 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC9.8□□□□□ -0.84
Pdlim4P70271 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC9.8□□□□□ -0.84
Pdlim4P70271 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pdlim4P70271 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Pdlim4P70271 AC091458.1-201ENSMUST00000220902 1361 ntBASIC9.8□□□□□ -0.84
Pdlim4P70271 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pdlim4P70271 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pdlim4P70271 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pdlim4P70271 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC9.8□□□□□ -0.84
Pdlim4P70271 Gm15236-201ENSMUST00000117309 379 ntBASIC9.8□□□□□ -0.84
Pdlim4P70271 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC9.8□□□□□ -0.84
Pdlim4P70271 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Pdlim4P70271 Mir7677-201ENSMUST00000184226 67 ntBASIC9.8□□□□□ -0.84
Pdlim4P70271 Gm35960-201ENSMUST00000202712 767 ntBASIC9.8□□□□□ -0.84
Pdlim4P70271 Gm45186-201ENSMUST00000206874 478 ntBASIC9.8□□□□□ -0.84
Pdlim4P70271 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pdlim4P70271 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Pdlim4P70271 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pdlim4P70271 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC9.8□□□□□ -0.84
Pdlim4P70271 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pdlim4P70271 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pdlim4P70271 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Pdlim4P70271 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Pdlim4P70271 AC129931.1-201ENSMUST00000228865 1861 ntBASIC9.8□□□□□ -0.84
Pdlim4P70271 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pdlim4P70271 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pdlim4P70271 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pdlim4P70271 Gm28719-201ENSMUST00000187779 1757 ntBASIC9.8□□□□□ -0.84
Pdlim4P70271 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Pdlim4P70271 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Pdlim4P70271 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC9.8□□□□□ -0.84
Pdlim4P70271 Rab3c-202ENSMUST00000223922 2398 ntBASIC9.8□□□□□ -0.84
Pdlim4P70271 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pdlim4P70271 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pdlim4P70271 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pdlim4P70271 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pdlim4P70271 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pdlim4P70271 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Pdlim4P70271 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Pdlim4P70271 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC9.8□□□□□ -0.84
Pdlim4P70271 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Pdlim4P70271 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Pdlim4P70271 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 AC173482.6-201ENSMUST00000225889 1741 ntBASIC9.79□□□□□ -0.84
Pdlim4P70271 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Pdlim4P70271 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Gm36987-201ENSMUST00000194704 2979 ntBASIC9.79□□□□□ -0.84
Pdlim4P70271 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Pdlim4P70271 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Pdlim4P70271 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC9.79□□□□□ -0.84
Pdlim4P70271 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC9.79□□□□□ -0.84
Pdlim4P70271 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC9.79□□□□□ -0.84
Pdlim4P70271 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC9.79□□□□□ -0.84
Pdlim4P70271 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Pdlim4P70271 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC9.79□□□□□ -0.84
Pdlim4P70271 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC9.79□□□□□ -0.84
Pdlim4P70271 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC9.79□□□□□ -0.84
Pdlim4P70271 Gm18893-201ENSMUST00000198416 943 ntBASIC9.79□□□□□ -0.84
Pdlim4P70271 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC9.79□□□□□ -0.84
Pdlim4P70271 Gm4157-201ENSMUST00000211647 679 ntBASIC9.79□□□□□ -0.84
Pdlim4P70271 Olfr1347-205ENSMUST00000220413 964 ntBASIC9.79□□□□□ -0.84
Pdlim4P70271 AC121960.1-201ENSMUST00000227982 564 ntBASIC9.79□□□□□ -0.84
Pdlim4P70271 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Pdlim4P70271 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC9.79□□□□□ -0.84
Pdlim4P70271 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Pdlim4P70271 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 AC171277.1-201ENSMUST00000216902 1441 ntBASIC9.79□□□□□ -0.84
Pdlim4P70271 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Pdlim4P70271 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Pdlim4P70271 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 129.9 ms