Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 CT868720.1-201ENSMUST00000223069 2544 ntBASIC10.63□□□□□ -0.71
Lsm3P62311 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC10.63□□□□□ -0.71
Lsm3P62311 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Lsm3P62311 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Lsm3P62311 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Lsm3P62311 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Lsm3P62311 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Lsm3P62311 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Lsm3P62311 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Lsm3P62311 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.63□□□□□ -0.71
Lsm3P62311 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Lsm3P62311 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Lsm3P62311 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Lsm3P62311 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Lsm3P62311 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Lsm3P62311 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Lsm3P62311 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm3P62311 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC10.62□□□□□ -0.71
Lsm3P62311 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm3P62311 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm3P62311 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm3P62311 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.62□□□□□ -0.71
Lsm3P62311 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm3P62311 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm3P62311 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm3P62311 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm3P62311 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm3P62311 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm3P62311 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.62□□□□□ -0.71
Lsm3P62311 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm3P62311 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm3P62311 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Lsm3P62311 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm3P62311 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Lsm3P62311 Gm12928-201ENSMUST00000117115 573 ntBASIC10.62□□□□□ -0.71
Lsm3P62311 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC10.62□□□□□ -0.71
Lsm3P62311 Gm11700-201ENSMUST00000119409 403 ntBASIC10.62□□□□□ -0.71
Lsm3P62311 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC10.62□□□□□ -0.71
Lsm3P62311 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm3P62311 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.62□□□□□ -0.71
Lsm3P62311 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC10.62□□□□□ -0.71
Lsm3P62311 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC10.62□□□□□ -0.71
Lsm3P62311 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm3P62311 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm3P62311 Mir7654-201ENSMUST00000185082 70 ntBASIC10.62□□□□□ -0.71
Lsm3P62311 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC10.62□□□□□ -0.71
Lsm3P62311 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm3P62311 Gm8598-201ENSMUST00000221184 836 ntBASIC10.62□□□□□ -0.71
Lsm3P62311 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm3P62311 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC10.62□□□□□ -0.71
Lsm3P62311 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Lsm3P62311 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm3P62311 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Lsm3P62311 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm3P62311 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm3P62311 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC10.62□□□□□ -0.71
Lsm3P62311 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm3P62311 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
Lsm3P62311 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm3P62311 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.62□□□□□ -0.71
Lsm3P62311 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.62□□□□□ -0.71
Lsm3P62311 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
Lsm3P62311 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm3P62311 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm3P62311 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm3P62311 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm3P62311 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm3P62311 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Lsm3P62311 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm3P62311 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Lsm3P62311 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Lsm3P62311 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
Lsm3P62311 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Lsm3P62311 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm3P62311 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm3P62311 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm3P62311 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm3P62311 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.61□□□□□ -0.71
Lsm3P62311 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm3P62311 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm3P62311 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Lsm3P62311 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm3P62311 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm3P62311 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.61□□□□□ -0.71
Lsm3P62311 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Lsm3P62311 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm3P62311 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Lsm3P62311 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm3P62311 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm3P62311 Gm12151-201ENSMUST00000121374 290 ntBASIC10.61□□□□□ -0.71
Lsm3P62311 Gm14719-201ENSMUST00000121891 340 ntBASIC10.61□□□□□ -0.71
Lsm3P62311 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm3P62311 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm3P62311 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC10.61□□□□□ -0.71
Lsm3P62311 Proscos-202ENSMUST00000178990 666 ntBASIC10.61□□□□□ -0.71
Lsm3P62311 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.61□□□□□ -0.71
Lsm3P62311 Gm38671-201ENSMUST00000200573 130 ntBASIC10.61□□□□□ -0.71
Lsm3P62311 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.61□□□□□ -0.71
Lsm3P62311 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Lsm3P62311 Gm19163-201ENSMUST00000223313 780 ntBASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms