Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 AC167022.1-201ENSMUST00000218647 1458 ntBASIC15.74■□□□□ 0.11
Nphp4P59240 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC15.74■□□□□ 0.11
Nphp4P59240 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nphp4P59240 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC15.74■□□□□ 0.11
Nphp4P59240 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC15.74■□□□□ 0.11
Nphp4P59240 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC15.74■□□□□ 0.11
Nphp4P59240 Rn7s6-201ENSMUST00000175005 291 ntBASIC15.74■□□□□ 0.11
Nphp4P59240 Mrip-ps-201ENSMUST00000184613 940 ntBASIC15.74■□□□□ 0.11
Nphp4P59240 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC15.74■□□□□ 0.11
Nphp4P59240 AC154305.2-201ENSMUST00000225813 901 ntBASIC15.74■□□□□ 0.11
Nphp4P59240 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nphp4P59240 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nphp4P59240 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nphp4P59240 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Nphp4P59240 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Nphp4P59240 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Nphp4P59240 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Nphp4P59240 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nphp4P59240 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nphp4P59240 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Nphp4P59240 AC117194.1-201ENSMUST00000224847 3002 ntBASIC15.73■□□□□ 0.11
Nphp4P59240 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Nphp4P59240 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nphp4P59240 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nphp4P59240 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nphp4P59240 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nphp4P59240 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Nphp4P59240 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Nphp4P59240 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Nphp4P59240 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nphp4P59240 Gm5308-201ENSMUST00000196752 1354 ntBASIC15.73■□□□□ 0.11
Nphp4P59240 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Nphp4P59240 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC15.73■□□□□ 0.11
Nphp4P59240 Btrc-209ENSMUST00000224478 2194 ntBASIC15.73■□□□□ 0.11
Nphp4P59240 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Nphp4P59240 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nphp4P59240 Gm9133-201ENSMUST00000118289 540 ntBASIC15.73■□□□□ 0.11
Nphp4P59240 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nphp4P59240 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nphp4P59240 Gm8723-201ENSMUST00000166076 820 ntBASIC15.73■□□□□ 0.11
Nphp4P59240 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nphp4P59240 Gm8701-201ENSMUST00000169259 874 ntBASIC15.73■□□□□ 0.11
Nphp4P59240 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC15.73■□□□□ 0.11
Nphp4P59240 Gm43912-201ENSMUST00000204352 538 ntBASIC15.73■□□□□ 0.11
Nphp4P59240 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC15.73■□□□□ 0.11
Nphp4P59240 Gm7525-201ENSMUST00000219425 454 ntBASIC15.73■□□□□ 0.11
Nphp4P59240 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nphp4P59240 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Nphp4P59240 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Nphp4P59240 Gm9244-201ENSMUST00000056767 2129 ntBASIC15.73■□□□□ 0.11
Nphp4P59240 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Nphp4P59240 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nphp4P59240 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nphp4P59240 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nphp4P59240 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nphp4P59240 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nphp4P59240 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nphp4P59240 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nphp4P59240 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nphp4P59240 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nphp4P59240 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Nphp4P59240 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC15.73■□□□□ 0.11
Nphp4P59240 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Nphp4P59240 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nphp4P59240 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Nphp4P59240 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nphp4P59240 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Nphp4P59240 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
Nphp4P59240 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Nphp4P59240 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nphp4P59240 Gm7278-201ENSMUST00000119836 1401 ntBASIC15.72■□□□□ 0.11
Nphp4P59240 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nphp4P59240 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nphp4P59240 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nphp4P59240 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nphp4P59240 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Nphp4P59240 Gm14398-201ENSMUST00000117287 1073 ntBASIC15.72■□□□□ 0.11
Nphp4P59240 Gm12179-201ENSMUST00000118344 1272 ntBASIC15.72■□□□□ 0.11
Nphp4P59240 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Nphp4P59240 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC15.72■□□□□ 0.11
Nphp4P59240 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC15.72■□□□□ 0.11
Nphp4P59240 Gm24248-201ENSMUST00000157321 322 ntBASIC15.72■□□□□ 0.11
Nphp4P59240 AC238811.4-201ENSMUST00000178019 1246 ntBASIC15.72■□□□□ 0.11
Nphp4P59240 AC238940.3-201ENSMUST00000178830 1246 ntBASIC15.72■□□□□ 0.11
Nphp4P59240 Gm9135-201ENSMUST00000182963 990 ntBASIC15.72■□□□□ 0.11
Nphp4P59240 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
Nphp4P59240 Gm42867-201ENSMUST00000202995 469 ntBASIC15.72■□□□□ 0.11
Nphp4P59240 AC122035.1-201ENSMUST00000227576 1016 ntBASIC15.72■□□□□ 0.11
Nphp4P59240 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Nphp4P59240 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nphp4P59240 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nphp4P59240 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nphp4P59240 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
Nphp4P59240 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nphp4P59240 Gm44755-201ENSMUST00000207830 2102 ntBASIC15.72■□□□□ 0.11
Nphp4P59240 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Nphp4P59240 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Nphp4P59240 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Nphp4P59240 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC15.72■□□□□ 0.11
Nphp4P59240 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms