Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup43P59235 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup43P59235 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup43P59235 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nup43P59235 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nup43P59235 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup43P59235 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nup43P59235 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Nup43P59235 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup43P59235 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Nup43P59235 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup43P59235 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Nup43P59235 Gm14058-201ENSMUST00000116082 735 ntBASIC11.09□□□□□ -0.63
Nup43P59235 Gm13035-201ENSMUST00000117496 342 ntBASIC11.09□□□□□ -0.63
Nup43P59235 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.09□□□□□ -0.63
Nup43P59235 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Nup43P59235 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.09□□□□□ -0.63
Nup43P59235 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.09□□□□□ -0.63
Nup43P59235 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Nup43P59235 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nup43P59235 Gm37466-201ENSMUST00000195692 652 ntBASIC11.09□□□□□ -0.63
Nup43P59235 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.09□□□□□ -0.63
Nup43P59235 Gm18515-201ENSMUST00000219755 797 ntBASIC11.09□□□□□ -0.63
Nup43P59235 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup43P59235 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nup43P59235 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup43P59235 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup43P59235 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Nup43P59235 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nup43P59235 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Nup43P59235 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup43P59235 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.09□□□□□ -0.63
Nup43P59235 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.09□□□□□ -0.63
Nup43P59235 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup43P59235 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Nup43P59235 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nup43P59235 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nup43P59235 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Nup43P59235 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Nup43P59235 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup43P59235 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.08□□□□□ -0.64
Nup43P59235 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup43P59235 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nup43P59235 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup43P59235 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.08□□□□□ -0.64
Nup43P59235 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup43P59235 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup43P59235 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Nup43P59235 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Nup43P59235 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nup43P59235 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup43P59235 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup43P59235 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup43P59235 Gm25116-201ENSMUST00000157191 122 ntBASIC11.08□□□□□ -0.64
Nup43P59235 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nup43P59235 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.08□□□□□ -0.64
Nup43P59235 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Nup43P59235 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.08□□□□□ -0.64
Nup43P59235 Gm25732-201ENSMUST00000175168 60 ntBASIC11.08□□□□□ -0.64
Nup43P59235 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Nup43P59235 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Nup43P59235 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.08□□□□□ -0.64
Nup43P59235 Gm5733-201ENSMUST00000190232 939 ntBASIC11.08□□□□□ -0.64
Nup43P59235 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup43P59235 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC11.08□□□□□ -0.64
Nup43P59235 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.08□□□□□ -0.64
Nup43P59235 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.08□□□□□ -0.64
Nup43P59235 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.08□□□□□ -0.64
Nup43P59235 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.08□□□□□ -0.64
Nup43P59235 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.08□□□□□ -0.64
Nup43P59235 Gm7848-201ENSMUST00000210739 718 ntBASIC11.08□□□□□ -0.64
Nup43P59235 AC125117.2-201ENSMUST00000228344 1140 ntBASIC11.08□□□□□ -0.64
Nup43P59235 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup43P59235 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup43P59235 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.08□□□□□ -0.64
Nup43P59235 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nup43P59235 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Nup43P59235 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup43P59235 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup43P59235 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup43P59235 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup43P59235 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nup43P59235 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Nup43P59235 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup43P59235 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup43P59235 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Nup43P59235 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nup43P59235 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup43P59235 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nup43P59235 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nup43P59235 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Nup43P59235 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nup43P59235 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup43P59235 Paupar-201ENSMUST00000194826 3482 ntBASIC11.07□□□□□ -0.64
Nup43P59235 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup43P59235 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup43P59235 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Nup43P59235 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup43P59235 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nup43P59235 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms