Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubgcp3P58854 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubgcp3P58854 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.98□□□□□ -0.49
Tubgcp3P58854 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Gm5616-201ENSMUST00000165252 384 ntBASIC11.98□□□□□ -0.49
Tubgcp3P58854 Gm8741-201ENSMUST00000174736 384 ntBASIC11.98□□□□□ -0.49
Tubgcp3P58854 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.98□□□□□ -0.49
Tubgcp3P58854 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Gm5705-201ENSMUST00000066241 711 ntBASIC11.98□□□□□ -0.49
Tubgcp3P58854 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tubgcp3P58854 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.98□□□□□ -0.49
Tubgcp3P58854 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Tubgcp3P58854 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tubgcp3P58854 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.98□□□□□ -0.49
Tubgcp3P58854 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Gm13996-201ENSMUST00000118456 430 ntBASIC11.97□□□□□ -0.49
Tubgcp3P58854 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Gm27627-201ENSMUST00000183644 150 ntBASIC11.97□□□□□ -0.49
Tubgcp3P58854 AY036118-201ENSMUST00000200021 923 ntBASIC11.97□□□□□ -0.49
Tubgcp3P58854 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Gm8913-201ENSMUST00000209491 641 ntBASIC11.97□□□□□ -0.49
Tubgcp3P58854 Gm17827-201ENSMUST00000211825 742 ntBASIC11.97□□□□□ -0.49
Tubgcp3P58854 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.97□□□□□ -0.49
Tubgcp3P58854 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tubgcp3P58854 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tubgcp3P58854 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tubgcp3P58854 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Tubgcp3P58854 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.96□□□□□ -0.49
Tubgcp3P58854 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Tubgcp3P58854 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tubgcp3P58854 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tubgcp3P58854 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms