Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm2P58774 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm2P58774 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm2P58774 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm2P58774 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm2P58774 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Tpm2P58774 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm2P58774 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm2P58774 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm2P58774 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm2P58774 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Tpm2P58774 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm2P58774 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm2P58774 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.48□□□□□ -0.25
Tpm2P58774 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm2P58774 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm2P58774 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.48□□□□□ -0.25
Tpm2P58774 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.48□□□□□ -0.25
Tpm2P58774 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.48□□□□□ -0.25
Tpm2P58774 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm2P58774 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm2P58774 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.48□□□□□ -0.25
Tpm2P58774 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.48□□□□□ -0.25
Tpm2P58774 Gm40466-201ENSMUST00000212174 422 ntBASIC13.48□□□□□ -0.25
Tpm2P58774 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm2P58774 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.48□□□□□ -0.25
Tpm2P58774 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.48□□□□□ -0.25
Tpm2P58774 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm2P58774 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm2P58774 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm2P58774 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Tpm2P58774 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm2P58774 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm2P58774 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
Tpm2P58774 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm2P58774 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm2P58774 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm2P58774 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Tpm2P58774 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm2P58774 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm2P58774 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Tpm2P58774 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm2P58774 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm2P58774 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm2P58774 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm2P58774 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm2P58774 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Tpm2P58774 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm2P58774 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm2P58774 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm2P58774 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Tpm2P58774 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Tpm2P58774 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm2P58774 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm2P58774 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.47□□□□□ -0.25
Tpm2P58774 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm2P58774 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm2P58774 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.47□□□□□ -0.25
Tpm2P58774 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm2P58774 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm2P58774 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.47□□□□□ -0.25
Tpm2P58774 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm2P58774 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm2P58774 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.47□□□□□ -0.25
Tpm2P58774 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.47□□□□□ -0.25
Tpm2P58774 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.47□□□□□ -0.25
Tpm2P58774 Gm29127-201ENSMUST00000188304 517 ntBASIC13.47□□□□□ -0.25
Tpm2P58774 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.47□□□□□ -0.25
Tpm2P58774 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm2P58774 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Tpm2P58774 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm2P58774 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Tpm2P58774 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm2P58774 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm2P58774 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm2P58774 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm2P58774 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm2P58774 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm2P58774 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm2P58774 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Tpm2P58774 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm2P58774 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm2P58774 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm2P58774 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Tpm2P58774 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm2P58774 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm2P58774 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Tpm2P58774 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm2P58774 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm2P58774 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm2P58774 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm2P58774 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm2P58774 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm2P58774 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC13.46□□□□□ -0.25
Tpm2P58774 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm2P58774 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Tpm2P58774 Gm45428-201ENSMUST00000209619 1789 ntBASIC13.46□□□□□ -0.25
Tpm2P58774 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm2P58774 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Tpm2P58774 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms