Protein–RNA interactions for Protein: P48985

Atoh1, Protein atonal homolog 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atoh1P48985 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Atoh1P48985 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atoh1P48985 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atoh1P48985 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.22□□□□□ -0.29
Atoh1P48985 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atoh1P48985 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Atoh1P48985 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Atoh1P48985 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
Atoh1P48985 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC13.22□□□□□ -0.29
Atoh1P48985 Gm25998-201ENSMUST00000175397 53 ntBASIC13.22□□□□□ -0.29
Atoh1P48985 Gm9162-201ENSMUST00000182081 991 ntBASIC13.22□□□□□ -0.29
Atoh1P48985 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC13.22□□□□□ -0.29
Atoh1P48985 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC13.22□□□□□ -0.29
Atoh1P48985 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC13.22□□□□□ -0.29
Atoh1P48985 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Atoh1P48985 Gm2594-201ENSMUST00000214774 742 ntBASIC13.22□□□□□ -0.29
Atoh1P48985 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Atoh1P48985 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC13.22□□□□□ -0.29
Atoh1P48985 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Atoh1P48985 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Atoh1P48985 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Atoh1P48985 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Atoh1P48985 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.22□□□□□ -0.29
Atoh1P48985 Gm8146-201ENSMUST00000192106 1847 ntBASIC13.22□□□□□ -0.29
Atoh1P48985 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Atoh1P48985 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atoh1P48985 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atoh1P48985 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Atoh1P48985 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atoh1P48985 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atoh1P48985 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atoh1P48985 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Atoh1P48985 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Atoh1P48985 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.22□□□□□ -0.29
Atoh1P48985 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Atoh1P48985 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Atoh1P48985 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Atoh1P48985 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Atoh1P48985 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Atoh1P48985 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Atoh1P48985 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Atoh1P48985 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Atoh1P48985 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Atoh1P48985 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Atoh1P48985 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.21□□□□□ -0.29
Atoh1P48985 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Atoh1P48985 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Atoh1P48985 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Atoh1P48985 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Atoh1P48985 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Atoh1P48985 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Atoh1P48985 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Atoh1P48985 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Atoh1P48985 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC13.21□□□□□ -0.29
Atoh1P48985 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC13.21□□□□□ -0.29
Atoh1P48985 Gm12906-201ENSMUST00000154610 441 ntBASIC13.21□□□□□ -0.29
Atoh1P48985 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Atoh1P48985 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Atoh1P48985 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Atoh1P48985 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Atoh1P48985 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Atoh1P48985 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Atoh1P48985 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Atoh1P48985 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC13.21□□□□□ -0.29
Atoh1P48985 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.21□□□□□ -0.29
Atoh1P48985 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Atoh1P48985 CT030166.5-201ENSMUST00000222249 420 ntBASIC13.21□□□□□ -0.29
Atoh1P48985 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Atoh1P48985 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Atoh1P48985 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Atoh1P48985 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Atoh1P48985 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Atoh1P48985 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Atoh1P48985 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.21□□□□□ -0.29
Atoh1P48985 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13.21□□□□□ -0.29
Atoh1P48985 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Atoh1P48985 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Atoh1P48985 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Atoh1P48985 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Atoh1P48985 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Atoh1P48985 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Atoh1P48985 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
Atoh1P48985 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Atoh1P48985 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Atoh1P48985 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Atoh1P48985 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Atoh1P48985 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Atoh1P48985 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atoh1P48985 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atoh1P48985 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Atoh1P48985 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atoh1P48985 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Atoh1P48985 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atoh1P48985 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Atoh1P48985 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atoh1P48985 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Atoh1P48985 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.2□□□□□ -0.3
Atoh1P48985 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
Atoh1P48985 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Atoh1P48985 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms