Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.61□□□□□ -0.71
Rfx3P48381 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.61□□□□□ -0.71
Rfx3P48381 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.61□□□□□ -0.71
Rfx3P48381 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rfx3P48381 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfx3P48381 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.6□□□□□ -0.71
Rfx3P48381 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfx3P48381 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfx3P48381 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Rfx3P48381 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.6□□□□□ -0.71
Rfx3P48381 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfx3P48381 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfx3P48381 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Rfx3P48381 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.6□□□□□ -0.71
Rfx3P48381 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfx3P48381 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rfx3P48381 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.6□□□□□ -0.71
Rfx3P48381 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfx3P48381 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfx3P48381 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Rfx3P48381 Gm14644-201ENSMUST00000116671 647 ntBASIC10.6□□□□□ -0.71
Rfx3P48381 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfx3P48381 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rfx3P48381 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
Rfx3P48381 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.6□□□□□ -0.71
Rfx3P48381 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfx3P48381 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.6□□□□□ -0.71
Rfx3P48381 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfx3P48381 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.6□□□□□ -0.71
Rfx3P48381 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfx3P48381 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.6□□□□□ -0.71
Rfx3P48381 Gm44364-201ENSMUST00000198368 141 ntBASIC10.6□□□□□ -0.71
Rfx3P48381 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Rfx3P48381 Gm6334-201ENSMUST00000207083 228 ntBASIC10.6□□□□□ -0.71
Rfx3P48381 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfx3P48381 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rfx3P48381 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfx3P48381 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfx3P48381 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfx3P48381 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfx3P48381 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfx3P48381 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfx3P48381 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfx3P48381 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.6□□□□□ -0.71
Rfx3P48381 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Rfx3P48381 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Rfx3P48381 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfx3P48381 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfx3P48381 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.6□□□□□ -0.71
Rfx3P48381 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Rfx3P48381 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfx3P48381 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfx3P48381 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Rfx3P48381 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Rfx3P48381 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
Rfx3P48381 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Rfx3P48381 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.59□□□□□ -0.71
Rfx3P48381 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.59□□□□□ -0.71
Rfx3P48381 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Rfx3P48381 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Rfx3P48381 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Rfx3P48381 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 Gm12015-201ENSMUST00000117065 843 ntBASIC10.59□□□□□ -0.71
Rfx3P48381 Gm11989-201ENSMUST00000117240 672 ntBASIC10.59□□□□□ -0.71
Rfx3P48381 Gm11362-201ENSMUST00000118838 850 ntBASIC10.59□□□□□ -0.71
Rfx3P48381 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 Gm27046-201ENSMUST00000182160 463 ntBASIC10.59□□□□□ -0.71
Rfx3P48381 Gm43822-201ENSMUST00000200285 476 ntBASIC10.59□□□□□ -0.71
Rfx3P48381 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Rfx3P48381 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms