Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gli1P47806 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gli1P47806 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gli1P47806 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gli1P47806 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gli1P47806 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gli1P47806 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.48□□□□□ -0.57
Gli1P47806 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gli1P47806 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gli1P47806 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.48□□□□□ -0.57
Gli1P47806 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.48□□□□□ -0.57
Gli1P47806 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.48□□□□□ -0.57
Gli1P47806 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gli1P47806 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gli1P47806 Gm9136-201ENSMUST00000193368 454 ntBASIC11.48□□□□□ -0.57
Gli1P47806 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gli1P47806 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gli1P47806 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gli1P47806 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.48□□□□□ -0.57
Gli1P47806 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Gli1P47806 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gli1P47806 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gli1P47806 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gli1P47806 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gli1P47806 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gli1P47806 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Gli1P47806 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gli1P47806 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gli1P47806 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Gli1P47806 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gli1P47806 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gli1P47806 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gli1P47806 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gli1P47806 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gli1P47806 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gli1P47806 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gli1P47806 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Gli1P47806 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gli1P47806 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gli1P47806 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.47□□□□□ -0.57
Gli1P47806 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gli1P47806 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.47□□□□□ -0.57
Gli1P47806 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gli1P47806 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gli1P47806 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gli1P47806 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Gli1P47806 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Gli1P47806 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Gli1P47806 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.47□□□□□ -0.57
Gli1P47806 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.47□□□□□ -0.57
Gli1P47806 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.47□□□□□ -0.57
Gli1P47806 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.47□□□□□ -0.57
Gli1P47806 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.47□□□□□ -0.57
Gli1P47806 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gli1P47806 Gm44651-201ENSMUST00000207343 372 ntBASIC11.47□□□□□ -0.57
Gli1P47806 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.47□□□□□ -0.57
Gli1P47806 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gli1P47806 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gli1P47806 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gli1P47806 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gli1P47806 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gli1P47806 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Gli1P47806 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gli1P47806 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Gli1P47806 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Gli1P47806 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gli1P47806 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gli1P47806 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gli1P47806 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gli1P47806 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gli1P47806 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Gli1P47806 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gli1P47806 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gli1P47806 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.46□□□□□ -0.57
Gli1P47806 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Gli1P47806 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gli1P47806 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gli1P47806 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gli1P47806 Gm23912-201ENSMUST00000104687 87 ntBASIC11.46□□□□□ -0.57
Gli1P47806 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Gli1P47806 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.46□□□□□ -0.57
Gli1P47806 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.46□□□□□ -0.57
Gli1P47806 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Gli1P47806 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.46□□□□□ -0.57
Gli1P47806 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.46□□□□□ -0.57
Gli1P47806 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gli1P47806 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Gli1P47806 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Gli1P47806 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Gli1P47806 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Gli1P47806 Gm42937-201ENSMUST00000197360 752 ntBASIC11.46□□□□□ -0.57
Gli1P47806 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.46□□□□□ -0.57
Gli1P47806 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.46□□□□□ -0.57
Gli1P47806 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gli1P47806 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gli1P47806 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gli1P47806 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gli1P47806 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Gli1P47806 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Gli1P47806 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms