Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-2P42586 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Nkx2-2P42586 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Nkx2-2P42586 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.74□□□□□ -0.69
Nkx2-2P42586 Gm38151-201ENSMUST00000195085 289 ntBASIC10.74□□□□□ -0.69
Nkx2-2P42586 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.74□□□□□ -0.69
Nkx2-2P42586 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.74□□□□□ -0.69
Nkx2-2P42586 Gm18056-201ENSMUST00000207670 568 ntBASIC10.74□□□□□ -0.69
Nkx2-2P42586 Gm18061-201ENSMUST00000208350 562 ntBASIC10.74□□□□□ -0.69
Nkx2-2P42586 Gm18063-201ENSMUST00000208529 568 ntBASIC10.74□□□□□ -0.69
Nkx2-2P42586 Gm18052-201ENSMUST00000208750 559 ntBASIC10.74□□□□□ -0.69
Nkx2-2P42586 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.74□□□□□ -0.69
Nkx2-2P42586 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-2P42586 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Nkx2-2P42586 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-2P42586 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-2P42586 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-2P42586 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-2P42586 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Nkx2-2P42586 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-2P42586 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-2P42586 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-2P42586 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.74□□□□□ -0.69
Nkx2-2P42586 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-2P42586 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-2P42586 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-2P42586 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.74□□□□□ -0.69
Nkx2-2P42586 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-2P42586 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-2P42586 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-2P42586 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-2P42586 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-2P42586 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx2-2P42586 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Nkx2-2P42586 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.74□□□□□ -0.69
Nkx2-2P42586 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-2P42586 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Gm23200-201ENSMUST00000104379 132 ntBASIC10.73□□□□□ -0.69
Nkx2-2P42586 Gm24891-201ENSMUST00000104391 136 ntBASIC10.73□□□□□ -0.69
Nkx2-2P42586 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Gm13263-201ENSMUST00000121271 838 ntBASIC10.73□□□□□ -0.69
Nkx2-2P42586 Gm10807-201ENSMUST00000177134 795 ntBASIC10.73□□□□□ -0.69
Nkx2-2P42586 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Gm5733-201ENSMUST00000190232 939 ntBASIC10.73□□□□□ -0.69
Nkx2-2P42586 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.73□□□□□ -0.69
Nkx2-2P42586 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC10.73□□□□□ -0.69
Nkx2-2P42586 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-2P42586 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Nkx2-2P42586 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC10.73□□□□□ -0.69
Nkx2-2P42586 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.73□□□□□ -0.69
Nkx2-2P42586 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Nkx2-2P42586 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-2P42586 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Nkx2-2P42586 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.72□□□□□ -0.69
Nkx2-2P42586 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms