Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Sox6P40645 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.04□□□□□ -0.64
Sox6P40645 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.04□□□□□ -0.64
Sox6P40645 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Sox6P40645 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Sox6P40645 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Sox6P40645 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Sox6P40645 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.04□□□□□ -0.64
Sox6P40645 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Sox6P40645 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox6P40645 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.03□□□□□ -0.64
Sox6P40645 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox6P40645 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Sox6P40645 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox6P40645 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Sox6P40645 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox6P40645 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.03□□□□□ -0.64
Sox6P40645 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Sox6P40645 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox6P40645 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox6P40645 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox6P40645 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox6P40645 Gm23270-201ENSMUST00000104055 131 ntBASIC11.03□□□□□ -0.64
Sox6P40645 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox6P40645 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.03□□□□□ -0.64
Sox6P40645 Gm14832-201ENSMUST00000121289 322 ntBASIC11.03□□□□□ -0.64
Sox6P40645 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox6P40645 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.03□□□□□ -0.64
Sox6P40645 Gm20482-202ENSMUST00000174729 825 ntBASIC11.03□□□□□ -0.64
Sox6P40645 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.03□□□□□ -0.64
Sox6P40645 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Sox6P40645 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.03□□□□□ -0.64
Sox6P40645 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox6P40645 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.03□□□□□ -0.64
Sox6P40645 Gm44882-201ENSMUST00000205702 802 ntBASIC11.03□□□□□ -0.64
Sox6P40645 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox6P40645 Gm10312-201ENSMUST00000078515 489 ntBASIC11.03□□□□□ -0.64
Sox6P40645 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Sox6P40645 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.03□□□□□ -0.64
Sox6P40645 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox6P40645 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.03□□□□□ -0.64
Sox6P40645 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox6P40645 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox6P40645 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Sox6P40645 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox6P40645 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox6P40645 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.03□□□□□ -0.64
Sox6P40645 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Sox6P40645 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox6P40645 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Sox6P40645 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Sox6P40645 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Sox6P40645 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sox6P40645 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Sox6P40645 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.02□□□□□ -0.64
Sox6P40645 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sox6P40645 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sox6P40645 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sox6P40645 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Sox6P40645 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sox6P40645 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Sox6P40645 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Sox6P40645 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Sox6P40645 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox6P40645 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Sox6P40645 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Sox6P40645 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Sox6P40645 Gm11930-201ENSMUST00000117788 190 ntBASIC11.02□□□□□ -0.65
Sox6P40645 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Sox6P40645 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.02□□□□□ -0.65
Sox6P40645 Gm27046-201ENSMUST00000182160 463 ntBASIC11.02□□□□□ -0.65
Sox6P40645 Gm27320-201ENSMUST00000184892 109 ntBASIC11.02□□□□□ -0.65
Sox6P40645 Gm42937-201ENSMUST00000197360 752 ntBASIC11.02□□□□□ -0.65
Sox6P40645 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Sox6P40645 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.02□□□□□ -0.65
Sox6P40645 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.02□□□□□ -0.65
Sox6P40645 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.02□□□□□ -0.65
Sox6P40645 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox6P40645 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox6P40645 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Sox6P40645 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Sox6P40645 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC11.02□□□□□ -0.65
Sox6P40645 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox6P40645 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox6P40645 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Sox6P40645 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.02□□□□□ -0.65
Sox6P40645 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Sox6P40645 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms