Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
Timp3P39876 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Timp3P39876 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Timp3P39876 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Timp3P39876 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Timp3P39876 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Timp3P39876 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Timp3P39876 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Timp3P39876 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Timp3P39876 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Timp3P39876 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Timp3P39876 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Timp3P39876 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Timp3P39876 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Timp3P39876 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Timp3P39876 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC9.67□□□□□ -0.86
Timp3P39876 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Timp3P39876 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Timp3P39876 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Timp3P39876 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Timp3P39876 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Timp3P39876 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Timp3P39876 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Timp3P39876 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Timp3P39876 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Timp3P39876 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Timp3P39876 Gm13035-201ENSMUST00000117496 342 ntBASIC9.67□□□□□ -0.86
Timp3P39876 Gm13611-201ENSMUST00000118269 318 ntBASIC9.67□□□□□ -0.86
Timp3P39876 Gm12196-201ENSMUST00000120954 262 ntBASIC9.67□□□□□ -0.86
Timp3P39876 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC9.67□□□□□ -0.86
Timp3P39876 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC9.67□□□□□ -0.86
Timp3P39876 Rprl1-201ENSMUST00000158050 327 ntBASIC9.67□□□□□ -0.86
Timp3P39876 H2-Q3-201ENSMUST00000172583 608 ntBASIC9.67□□□□□ -0.86
Timp3P39876 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC9.67□□□□□ -0.86
Timp3P39876 Ighv1-60-201ENSMUST00000195816 405 ntBASIC9.67□□□□□ -0.86
Timp3P39876 Gm42599-201ENSMUST00000201308 469 ntBASIC9.67□□□□□ -0.86
Timp3P39876 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC9.67□□□□□ -0.86
Timp3P39876 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC9.67□□□□□ -0.86
Timp3P39876 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC9.67□□□□□ -0.86
Timp3P39876 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Timp3P39876 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Timp3P39876 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Timp3P39876 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Timp3P39876 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Timp3P39876 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Timp3P39876 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Timp3P39876 AC126257.2-201ENSMUST00000215507 2300 ntBASIC9.67□□□□□ -0.86
Timp3P39876 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Timp3P39876 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Timp3P39876 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
Timp3P39876 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Timp3P39876 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Timp3P39876 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
Timp3P39876 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Timp3P39876 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Timp3P39876 Gm38187-201ENSMUST00000195609 4709 ntBASIC9.67□□□□□ -0.86
Timp3P39876 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Timp3P39876 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Timp3P39876 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Timp3P39876 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Timp3P39876 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Timp3P39876 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Timp3P39876 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 AC166359.1-201ENSMUST00000220243 1871 ntBASIC9.66□□□□□ -0.86
Timp3P39876 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Timp3P39876 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC9.66□□□□□ -0.86
Timp3P39876 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Timp3P39876 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC9.66□□□□□ -0.86
Timp3P39876 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC9.66□□□□□ -0.86
Timp3P39876 Gm26286-201ENSMUST00000104166 134 ntBASIC9.66□□□□□ -0.86
Timp3P39876 Gm23596-201ENSMUST00000104304 132 ntBASIC9.66□□□□□ -0.86
Timp3P39876 Gm24891-201ENSMUST00000104391 136 ntBASIC9.66□□□□□ -0.86
Timp3P39876 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC9.66□□□□□ -0.86
Timp3P39876 Gm14058-201ENSMUST00000116082 735 ntBASIC9.66□□□□□ -0.86
Timp3P39876 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC9.66□□□□□ -0.86
Timp3P39876 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC9.66□□□□□ -0.86
Timp3P39876 Gm25881-201ENSMUST00000157783 103 ntBASIC9.66□□□□□ -0.86
Timp3P39876 Gm9550-201ENSMUST00000161130 862 ntBASIC9.66□□□□□ -0.86
Timp3P39876 Gm20426-201ENSMUST00000173657 440 ntBASIC9.66□□□□□ -0.86
Timp3P39876 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC9.66□□□□□ -0.86
Timp3P39876 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Gm42629-201ENSMUST00000199063 1102 ntBASIC9.66□□□□□ -0.86
Timp3P39876 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Timp3P39876 Gm44882-201ENSMUST00000205702 802 ntBASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms