Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Mmp13P33435 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp13P33435 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Mmp13P33435 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.01□□□□□ -0.49
Mmp13P33435 Gm29199-201ENSMUST00000187766 775 ntBASIC12.01□□□□□ -0.49
Mmp13P33435 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.01□□□□□ -0.49
Mmp13P33435 Rprl1-202ENSMUST00000198476 238 ntBASIC12.01□□□□□ -0.49
Mmp13P33435 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp13P33435 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.01□□□□□ -0.49
Mmp13P33435 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.01□□□□□ -0.49
Mmp13P33435 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp13P33435 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.01□□□□□ -0.49
Mmp13P33435 Gm19994-201ENSMUST00000217086 586 ntBASIC12.01□□□□□ -0.49
Mmp13P33435 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.01□□□□□ -0.49
Mmp13P33435 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.01□□□□□ -0.49
Mmp13P33435 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.01□□□□□ -0.49
Mmp13P33435 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp13P33435 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp13P33435 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp13P33435 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp13P33435 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp13P33435 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp13P33435 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp13P33435 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.01□□□□□ -0.49
Mmp13P33435 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp13P33435 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Mmp13P33435 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp13P33435 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp13P33435 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp13P33435 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Mmp13P33435 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp13P33435 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp13P33435 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC12□□□□□ -0.49
Mmp13P33435 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp13P33435 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Mmp13P33435 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp13P33435 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp13P33435 Gm43963-201ENSMUST00000203466 2488 ntBASIC12□□□□□ -0.49
Mmp13P33435 Gm43242-201ENSMUST00000199507 1776 ntBASIC12□□□□□ -0.49
Mmp13P33435 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp13P33435 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12□□□□□ -0.49
Mmp13P33435 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp13P33435 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12□□□□□ -0.49
Mmp13P33435 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp13P33435 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp13P33435 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp13P33435 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp13P33435 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12□□□□□ -0.49
Mmp13P33435 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12□□□□□ -0.49
Mmp13P33435 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12□□□□□ -0.49
Mmp13P33435 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12□□□□□ -0.49
Mmp13P33435 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12□□□□□ -0.49
Mmp13P33435 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12□□□□□ -0.49
Mmp13P33435 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp13P33435 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp13P33435 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp13P33435 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12□□□□□ -0.49
Mmp13P33435 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp13P33435 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp13P33435 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp13P33435 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp13P33435 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp13P33435 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp13P33435 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp13P33435 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Mmp13P33435 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp13P33435 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp13P33435 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp13P33435 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Mmp13P33435 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12□□□□□ -0.49
Mmp13P33435 Gm45495-201ENSMUST00000200940 1700 ntBASIC12□□□□□ -0.49
Mmp13P33435 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Mmp13P33435 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp13P33435 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Mmp13P33435 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp13P33435 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp13P33435 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp13P33435 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Mmp13P33435 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp13P33435 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp13P33435 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp13P33435 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.99□□□□□ -0.49
Mmp13P33435 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp13P33435 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.99□□□□□ -0.49
Mmp13P33435 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp13P33435 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Mmp13P33435 Gm5419-201ENSMUST00000119301 527 ntBASIC11.99□□□□□ -0.49
Mmp13P33435 Gm7722-201ENSMUST00000120646 741 ntBASIC11.99□□□□□ -0.49
Mmp13P33435 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp13P33435 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.99□□□□□ -0.49
Mmp13P33435 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.99□□□□□ -0.49
Mmp13P33435 Gm18893-201ENSMUST00000198416 943 ntBASIC11.99□□□□□ -0.49
Mmp13P33435 Gm43002-201ENSMUST00000200310 155 ntBASIC11.99□□□□□ -0.49
Mmp13P33435 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.99□□□□□ -0.49
Mmp13P33435 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp13P33435 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp13P33435 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp13P33435 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.99□□□□□ -0.49
Mmp13P33435 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Mmp13P33435 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms