Protein–RNA interactions for Protein: P31245

Hoxa2, Homeobox protein Hox-A2, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa2P31245 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa2P31245 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa2P31245 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa2P31245 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa2P31245 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC12.32□□□□□ -0.44
Hoxa2P31245 5031425E22Rik-205ENSMUST00000191186 719 ntTSL 3 BASIC12.32□□□□□ -0.44
Hoxa2P31245 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa2P31245 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC12.32□□□□□ -0.44
Hoxa2P31245 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC12.32□□□□□ -0.44
Hoxa2P31245 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC12.32□□□□□ -0.44
Hoxa2P31245 Gm37201-201ENSMUST00000191845 523 ntBASIC12.32□□□□□ -0.44
Hoxa2P31245 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC12.32□□□□□ -0.44
Hoxa2P31245 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.32□□□□□ -0.44
Hoxa2P31245 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.32□□□□□ -0.44
Hoxa2P31245 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC12.32□□□□□ -0.44
Hoxa2P31245 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC12.32□□□□□ -0.44
Hoxa2P31245 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa2P31245 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa2P31245 Gm18985-201ENSMUST00000196472 1079 ntBASIC12.32□□□□□ -0.44
Hoxa2P31245 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.32□□□□□ -0.44
Hoxa2P31245 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa2P31245 Gm43905-201ENSMUST00000204516 204 ntBASIC12.32□□□□□ -0.44
Hoxa2P31245 Gm13097-201ENSMUST00000210722 397 ntBASIC12.32□□□□□ -0.44
Hoxa2P31245 AC164123.1-201ENSMUST00000213385 447 ntTSL 5 BASIC12.32□□□□□ -0.44
Hoxa2P31245 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.32□□□□□ -0.44
Hoxa2P31245 AC123835.1-201ENSMUST00000214362 670 ntBASIC12.32□□□□□ -0.44
Hoxa2P31245 Gm15283-202ENSMUST00000221427 818 ntTSL 5 BASIC12.32□□□□□ -0.44
Hoxa2P31245 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.32□□□□□ -0.44
Hoxa2P31245 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa2P31245 Cd40lg-201ENSMUST00000033466 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa2P31245 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa2P31245 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa2P31245 Vmn1r201-201ENSMUST00000091730 903 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Hoxa2P31245 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa2P31245 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa2P31245 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hoxa2P31245 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa2P31245 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa2P31245 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa2P31245 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.32□□□□□ -0.44
Hoxa2P31245 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa2P31245 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.32□□□□□ -0.44
Hoxa2P31245 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa2P31245 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa2P31245 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa2P31245 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hoxa2P31245 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa2P31245 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa2P31245 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Hoxa2P31245 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa2P31245 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa2P31245 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
Hoxa2P31245 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa2P31245 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa2P31245 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa2P31245 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa2P31245 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa2P31245 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa2P31245 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa2P31245 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa2P31245 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Hoxa2P31245 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa2P31245 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa2P31245 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa2P31245 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Hoxa2P31245 Gm14550-201ENSMUST00000117918 407 ntBASIC12.31□□□□□ -0.44
Hoxa2P31245 Gm6611-201ENSMUST00000163830 1272 ntBASIC12.31□□□□□ -0.44
Hoxa2P31245 Gm17376-201ENSMUST00000166016 84 ntBASIC12.31□□□□□ -0.44
Hoxa2P31245 Gm8018-201ENSMUST00000173536 789 ntBASIC12.31□□□□□ -0.44
Hoxa2P31245 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Hoxa2P31245 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC12.31□□□□□ -0.44
Hoxa2P31245 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa2P31245 Gm27155-201ENSMUST00000183716 898 ntBASIC12.31□□□□□ -0.44
Hoxa2P31245 Gm21083-201ENSMUST00000188807 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa2P31245 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC12.31□□□□□ -0.44
Hoxa2P31245 4930405L22Rik-201ENSMUST00000198088 585 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa2P31245 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa2P31245 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC12.31□□□□□ -0.44
Hoxa2P31245 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.31□□□□□ -0.44
Hoxa2P31245 CT025618.1-201ENSMUST00000227409 1279 ntBASIC12.31□□□□□ -0.44
Hoxa2P31245 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa2P31245 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa2P31245 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa2P31245 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Hoxa2P31245 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Hoxa2P31245 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Hoxa2P31245 Mir433-201ENSMUST00000093564 124 ntBASIC12.31□□□□□ -0.44
Hoxa2P31245 Gm17415-201ENSMUST00000096427 789 ntBASIC12.31□□□□□ -0.44
Hoxa2P31245 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.31□□□□□ -0.44
Hoxa2P31245 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Hoxa2P31245 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Hoxa2P31245 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.31□□□□□ -0.44
Hoxa2P31245 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa2P31245 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa2P31245 Gm44441-201ENSMUST00000203642 2475 ntBASIC12.31□□□□□ -0.44
Hoxa2P31245 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa2P31245 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hoxa2P31245 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.3□□□□□ -0.44
Hoxa2P31245 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hoxa2P31245 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms