Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Col2a1P28481 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col2a1P28481 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col2a1P28481 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col2a1P28481 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col2a1P28481 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Col2a1P28481 Gm12389-201ENSMUST00000117696 418 ntBASIC13.15□□□□□ -0.3
Col2a1P28481 Mup-ps29-201ENSMUST00000122281 202 ntBASIC13.15□□□□□ -0.3
Col2a1P28481 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col2a1P28481 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col2a1P28481 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
Col2a1P28481 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col2a1P28481 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Col2a1P28481 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Col2a1P28481 CT030653.1-201ENSMUST00000224382 1279 ntBASIC13.15□□□□□ -0.3
Col2a1P28481 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Col2a1P28481 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col2a1P28481 Gm9244-201ENSMUST00000056767 2129 ntBASIC13.15□□□□□ -0.3
Col2a1P28481 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC13.15□□□□□ -0.3
Col2a1P28481 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col2a1P28481 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col2a1P28481 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col2a1P28481 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col2a1P28481 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col2a1P28481 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.15□□□□□ -0.3
Col2a1P28481 Gm44573-201ENSMUST00000191753 2370 ntBASIC13.15□□□□□ -0.3
Col2a1P28481 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col2a1P28481 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Col2a1P28481 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Col2a1P28481 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Col2a1P28481 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Col2a1P28481 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Col2a1P28481 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col2a1P28481 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Col2a1P28481 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Col2a1P28481 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col2a1P28481 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col2a1P28481 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col2a1P28481 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col2a1P28481 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.14□□□□□ -0.31
Col2a1P28481 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.14□□□□□ -0.31
Col2a1P28481 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Col2a1P28481 Gm6024-201ENSMUST00000117850 1558 ntBASIC13.14□□□□□ -0.31
Col2a1P28481 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col2a1P28481 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Col2a1P28481 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.14□□□□□ -0.31
Col2a1P28481 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Col2a1P28481 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.14□□□□□ -0.31
Col2a1P28481 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col2a1P28481 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col2a1P28481 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col2a1P28481 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col2a1P28481 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Col2a1P28481 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col2a1P28481 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col2a1P28481 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC13.14□□□□□ -0.31
Col2a1P28481 Gm24809-201ENSMUST00000175318 271 ntBASIC13.14□□□□□ -0.31
Col2a1P28481 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC13.14□□□□□ -0.31
Col2a1P28481 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC13.14□□□□□ -0.31
Col2a1P28481 AC174797.2-202ENSMUST00000225729 568 ntBASIC13.14□□□□□ -0.31
Col2a1P28481 Gm8420-201ENSMUST00000097103 598 ntBASIC13.14□□□□□ -0.31
Col2a1P28481 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.14□□□□□ -0.31
Col2a1P28481 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Col2a1P28481 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC13.14□□□□□ -0.31
Col2a1P28481 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col2a1P28481 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col2a1P28481 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col2a1P28481 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col2a1P28481 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.14□□□□□ -0.31
Col2a1P28481 Gm15784-201ENSMUST00000120260 1462 ntBASIC13.14□□□□□ -0.31
Col2a1P28481 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col2a1P28481 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
Col2a1P28481 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col2a1P28481 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col2a1P28481 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col2a1P28481 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col2a1P28481 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Col2a1P28481 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col2a1P28481 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col2a1P28481 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
Col2a1P28481 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col2a1P28481 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col2a1P28481 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col2a1P28481 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col2a1P28481 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col2a1P28481 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Col2a1P28481 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Col2a1P28481 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col2a1P28481 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.13□□□□□ -0.31
Col2a1P28481 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.13□□□□□ -0.31
Col2a1P28481 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col2a1P28481 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Col2a1P28481 Gm12179-201ENSMUST00000118344 1272 ntBASIC13.13□□□□□ -0.31
Col2a1P28481 Gm4917-201ENSMUST00000121452 650 ntBASIC13.13□□□□□ -0.31
Col2a1P28481 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC13.13□□□□□ -0.31
Col2a1P28481 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC13.13□□□□□ -0.31
Col2a1P28481 Gm8723-201ENSMUST00000166076 820 ntBASIC13.13□□□□□ -0.31
Col2a1P28481 Gm8701-201ENSMUST00000169259 874 ntBASIC13.13□□□□□ -0.31
Col2a1P28481 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC13.13□□□□□ -0.31
Col2a1P28481 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms