Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Cd40lgP27548 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Cd40lgP27548 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.67
Cd40lgP27548 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
Cd40lgP27548 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd40lgP27548 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd40lgP27548 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd40lgP27548 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd40lgP27548 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd40lgP27548 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd40lgP27548 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Cd40lgP27548 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Cd40lgP27548 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.89□□□□□ -0.67
Cd40lgP27548 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.89□□□□□ -0.67
Cd40lgP27548 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd40lgP27548 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.89□□□□□ -0.67
Cd40lgP27548 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC10.89□□□□□ -0.67
Cd40lgP27548 AC113441.2-201ENSMUST00000221538 1468 ntBASIC10.89□□□□□ -0.67
Cd40lgP27548 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Cd40lgP27548 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd40lgP27548 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cd40lgP27548 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd40lgP27548 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.89□□□□□ -0.67
Cd40lgP27548 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.89□□□□□ -0.67
Cd40lgP27548 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd40lgP27548 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Cd40lgP27548 Gm24990-201ENSMUST00000157406 323 ntBASIC10.89□□□□□ -0.67
Cd40lgP27548 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.89□□□□□ -0.67
Cd40lgP27548 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd40lgP27548 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.89□□□□□ -0.67
Cd40lgP27548 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cd40lgP27548 AY036118-201ENSMUST00000200021 923 ntBASIC10.89□□□□□ -0.67
Cd40lgP27548 Gm43962-201ENSMUST00000203898 190 ntBASIC10.89□□□□□ -0.67
Cd40lgP27548 Gm45224-201ENSMUST00000208203 414 ntBASIC10.89□□□□□ -0.67
Cd40lgP27548 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.89□□□□□ -0.67
Cd40lgP27548 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.89□□□□□ -0.67
Cd40lgP27548 Gm19994-201ENSMUST00000217086 586 ntBASIC10.89□□□□□ -0.67
Cd40lgP27548 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd40lgP27548 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Cd40lgP27548 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd40lgP27548 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd40lgP27548 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd40lgP27548 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.89□□□□□ -0.67
Cd40lgP27548 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd40lgP27548 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cd40lgP27548 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd40lgP27548 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd40lgP27548 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.89□□□□□ -0.67
Cd40lgP27548 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cd40lgP27548 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.89□□□□□ -0.67
Cd40lgP27548 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd40lgP27548 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cd40lgP27548 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.89□□□□□ -0.67
Cd40lgP27548 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cd40lgP27548 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Cd40lgP27548 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd40lgP27548 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd40lgP27548 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.88□□□□□ -0.67
Cd40lgP27548 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd40lgP27548 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Cd40lgP27548 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cd40lgP27548 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cd40lgP27548 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cd40lgP27548 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd40lgP27548 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC10.88□□□□□ -0.67
Cd40lgP27548 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd40lgP27548 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Cd40lgP27548 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd40lgP27548 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cd40lgP27548 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Cd40lgP27548 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd40lgP27548 Gm11439-201ENSMUST00000118598 409 ntBASIC10.88□□□□□ -0.67
Cd40lgP27548 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.88□□□□□ -0.67
Cd40lgP27548 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.88□□□□□ -0.67
Cd40lgP27548 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cd40lgP27548 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.88□□□□□ -0.67
Cd40lgP27548 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cd40lgP27548 Mir7677-201ENSMUST00000184226 67 ntBASIC10.88□□□□□ -0.67
Cd40lgP27548 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC10.88□□□□□ -0.67
Cd40lgP27548 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Cd40lgP27548 Gm17827-201ENSMUST00000211825 742 ntBASIC10.88□□□□□ -0.67
Cd40lgP27548 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.88□□□□□ -0.67
Cd40lgP27548 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.88□□□□□ -0.67
Cd40lgP27548 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd40lgP27548 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.88□□□□□ -0.67
Cd40lgP27548 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd40lgP27548 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.88□□□□□ -0.67
Cd40lgP27548 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cd40lgP27548 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd40lgP27548 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cd40lgP27548 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.88□□□□□ -0.67
Cd40lgP27548 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cd40lgP27548 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd40lgP27548 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cd40lgP27548 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd40lgP27548 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.88□□□□□ -0.67
Cd40lgP27548 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cd40lgP27548 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Cd40lgP27548 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.88□□□□□ -0.67
Cd40lgP27548 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms