Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Gm19015-201ENSMUST00000184002 1189 ntBASIC12.16□□□□□ -0.46
Hoxd8P23463 Gm43163-201ENSMUST00000196571 442 ntBASIC12.16□□□□□ -0.46
Hoxd8P23463 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.16□□□□□ -0.46
Hoxd8P23463 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxd8P23463 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.16□□□□□ -0.46
Hoxd8P23463 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxd8P23463 Lgi3-203ENSMUST00000226548 1001 ntBASIC12.16□□□□□ -0.46
Hoxd8P23463 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Hoxd8P23463 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxd8P23463 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxd8P23463 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxd8P23463 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxd8P23463 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxd8P23463 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxd8P23463 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxd8P23463 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxd8P23463 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxd8P23463 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxd8P23463 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxd8P23463 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxd8P23463 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.16□□□□□ -0.46
Hoxd8P23463 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxd8P23463 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxd8P23463 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxd8P23463 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Hoxd8P23463 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.16□□□□□ -0.46
Hoxd8P23463 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxd8P23463 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Hoxd8P23463 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hoxd8P23463 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxd8P23463 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxd8P23463 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxd8P23463 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxd8P23463 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxd8P23463 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxd8P23463 Mir181d-201ENSMUST00000102383 72 ntBASIC12.15□□□□□ -0.46
Hoxd8P23463 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxd8P23463 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxd8P23463 Gm12467-201ENSMUST00000117625 745 ntBASIC12.15□□□□□ -0.46
Hoxd8P23463 Gm14071-201ENSMUST00000117817 509 ntBASIC12.15□□□□□ -0.46
Hoxd8P23463 Gm15528-201ENSMUST00000117821 864 ntBASIC12.15□□□□□ -0.46
Hoxd8P23463 Gm15329-201ENSMUST00000121408 155 ntBASIC12.15□□□□□ -0.46
Hoxd8P23463 Gm10169-201ENSMUST00000121822 348 ntBASIC12.15□□□□□ -0.46
Hoxd8P23463 Gm12628-201ENSMUST00000122193 382 ntBASIC12.15□□□□□ -0.46
Hoxd8P23463 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC12.15□□□□□ -0.46
Hoxd8P23463 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxd8P23463 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.15□□□□□ -0.46
Hoxd8P23463 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxd8P23463 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Hoxd8P23463 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Hoxd8P23463 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC12.15□□□□□ -0.46
Hoxd8P23463 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.15□□□□□ -0.46
Hoxd8P23463 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.15□□□□□ -0.46
Hoxd8P23463 Gm30671-201ENSMUST00000214898 318 ntBASIC12.15□□□□□ -0.46
Hoxd8P23463 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.15□□□□□ -0.46
Hoxd8P23463 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.15□□□□□ -0.46
Hoxd8P23463 Gm5468-202ENSMUST00000227851 682 ntBASIC12.15□□□□□ -0.46
Hoxd8P23463 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxd8P23463 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxd8P23463 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxd8P23463 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Hoxd8P23463 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxd8P23463 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxd8P23463 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Hoxd8P23463 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxd8P23463 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Hoxd8P23463 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxd8P23463 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxd8P23463 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxd8P23463 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxd8P23463 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxd8P23463 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxd8P23463 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hoxd8P23463 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.15□□□□□ -0.46
Hoxd8P23463 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Hoxd8P23463 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hoxd8P23463 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hoxd8P23463 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hoxd8P23463 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC12.14□□□□□ -0.47
Hoxd8P23463 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxd8P23463 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.14□□□□□ -0.47
Hoxd8P23463 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxd8P23463 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.14□□□□□ -0.47
Hoxd8P23463 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxd8P23463 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxd8P23463 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxd8P23463 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.14□□□□□ -0.47
Hoxd8P23463 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxd8P23463 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.14□□□□□ -0.47
Hoxd8P23463 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxd8P23463 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxd8P23463 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hoxd8P23463 Gm5909-201ENSMUST00000119768 1281 ntBASIC12.14□□□□□ -0.47
Hoxd8P23463 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC12.14□□□□□ -0.47
Hoxd8P23463 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.14□□□□□ -0.47
Hoxd8P23463 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC12.14□□□□□ -0.47
Hoxd8P23463 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.14□□□□□ -0.47
Hoxd8P23463 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.14□□□□□ -0.47
Hoxd8P23463 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC12.14□□□□□ -0.47
Hoxd8P23463 Gm38217-201ENSMUST00000194358 910 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms