Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
BdnfP21237 Mir7085-201ENSMUST00000184353 66 ntBASIC11.29□□□□□ -0.6
BdnfP21237 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Gm37489-201ENSMUST00000191883 159 ntBASIC11.29□□□□□ -0.6
BdnfP21237 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Gm7046-201ENSMUST00000221351 977 ntBASIC11.29□□□□□ -0.6
BdnfP21237 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Gm9996-201ENSMUST00000070359 913 ntBASIC11.29□□□□□ -0.6
BdnfP21237 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
BdnfP21237 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
BdnfP21237 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.29□□□□□ -0.6
BdnfP21237 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
BdnfP21237 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
BdnfP21237 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
BdnfP21237 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
BdnfP21237 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
BdnfP21237 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
BdnfP21237 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
BdnfP21237 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
BdnfP21237 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
BdnfP21237 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
BdnfP21237 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
BdnfP21237 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
BdnfP21237 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
BdnfP21237 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
BdnfP21237 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
BdnfP21237 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
BdnfP21237 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
BdnfP21237 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
BdnfP21237 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
BdnfP21237 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
BdnfP21237 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
BdnfP21237 Gm12164-201ENSMUST00000121695 551 ntBASIC11.28□□□□□ -0.6
BdnfP21237 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.28□□□□□ -0.6
BdnfP21237 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
BdnfP21237 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
BdnfP21237 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
BdnfP21237 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
BdnfP21237 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.28□□□□□ -0.6
BdnfP21237 Gm29396-201ENSMUST00000185659 716 ntBASIC11.28□□□□□ -0.6
BdnfP21237 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.28□□□□□ -0.6
BdnfP21237 Olfr284-202ENSMUST00000206647 966 ntBASIC11.28□□□□□ -0.6
BdnfP21237 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
BdnfP21237 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
BdnfP21237 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.28□□□□□ -0.6
BdnfP21237 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
BdnfP21237 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
BdnfP21237 Gm8420-201ENSMUST00000097103 598 ntBASIC11.28□□□□□ -0.6
BdnfP21237 Slc14a2-201ENSMUST00000025434 2793 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
BdnfP21237 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
BdnfP21237 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
BdnfP21237 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
BdnfP21237 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
BdnfP21237 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
BdnfP21237 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
BdnfP21237 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.28□□□□□ -0.6
BdnfP21237 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.28□□□□□ -0.6
BdnfP21237 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
BdnfP21237 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
BdnfP21237 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
BdnfP21237 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.28□□□□□ -0.6
BdnfP21237 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
BdnfP21237 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
BdnfP21237 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC11.28□□□□□ -0.6
BdnfP21237 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
BdnfP21237 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.27□□□□□ -0.6
BdnfP21237 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
BdnfP21237 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
BdnfP21237 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
BdnfP21237 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
BdnfP21237 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
BdnfP21237 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
BdnfP21237 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
BdnfP21237 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.27□□□□□ -0.61
BdnfP21237 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.27□□□□□ -0.61
BdnfP21237 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.27□□□□□ -0.61
BdnfP21237 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
BdnfP21237 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
BdnfP21237 Gm13297-201ENSMUST00000120205 934 ntBASIC11.27□□□□□ -0.61
BdnfP21237 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms