Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Gm6450-201ENSMUST00000200896 574 ntBASIC11.32□□□□□ -0.6
Fv4P11370 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Fv4P11370 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fv4P11370 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fv4P11370 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fv4P11370 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Fv4P11370 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fv4P11370 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fv4P11370 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fv4P11370 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fv4P11370 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fv4P11370 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fv4P11370 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fv4P11370 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
Fv4P11370 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fv4P11370 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fv4P11370 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Fv4P11370 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Fv4P11370 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.32□□□□□ -0.6
Fv4P11370 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.32□□□□□ -0.6
Fv4P11370 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Fv4P11370 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.32□□□□□ -0.6
Fv4P11370 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Fv4P11370 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fv4P11370 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fv4P11370 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.32□□□□□ -0.6
Fv4P11370 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fv4P11370 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Fv4P11370 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Fv4P11370 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fv4P11370 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.31□□□□□ -0.6
Fv4P11370 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Fv4P11370 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fv4P11370 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fv4P11370 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.31□□□□□ -0.6
Fv4P11370 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.31□□□□□ -0.6
Fv4P11370 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fv4P11370 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fv4P11370 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fv4P11370 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fv4P11370 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Fv4P11370 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Fv4P11370 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Fv4P11370 Gm24255-201ENSMUST00000104481 128 ntBASIC11.31□□□□□ -0.6
Fv4P11370 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Fv4P11370 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.31□□□□□ -0.6
Fv4P11370 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Fv4P11370 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Fv4P11370 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Fv4P11370 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Fv4P11370 Gm15276-201ENSMUST00000145953 498 ntBASIC11.31□□□□□ -0.6
Fv4P11370 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.31□□□□□ -0.6
Fv4P11370 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fv4P11370 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Fv4P11370 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.31□□□□□ -0.6
Fv4P11370 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.31□□□□□ -0.6
Fv4P11370 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.31□□□□□ -0.6
Fv4P11370 Gm13097-201ENSMUST00000210722 397 ntBASIC11.31□□□□□ -0.6
Fv4P11370 Gm807-202ENSMUST00000224929 408 ntBASIC11.31□□□□□ -0.6
Fv4P11370 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Fv4P11370 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.31□□□□□ -0.6
Fv4P11370 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fv4P11370 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fv4P11370 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Fv4P11370 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.31□□□□□ -0.6
Fv4P11370 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.31□□□□□ -0.6
Fv4P11370 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fv4P11370 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Fv4P11370 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Fv4P11370 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fv4P11370 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fv4P11370 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fv4P11370 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fv4P11370 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fv4P11370 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fv4P11370 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Fv4P11370 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Fv4P11370 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fv4P11370 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Fv4P11370 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.3□□□□□ -0.6
Fv4P11370 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fv4P11370 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fv4P11370 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fv4P11370 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fv4P11370 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fv4P11370 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Fv4P11370 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fv4P11370 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fv4P11370 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fv4P11370 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Fv4P11370 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fv4P11370 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fv4P11370 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fv4P11370 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fv4P11370 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fv4P11370 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fv4P11370 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Fv4P11370 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Fv4P11370 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Fv4P11370 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms