Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Ccl1P10146 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC9.05□□□□□ -0.96
Ccl1P10146 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Ccl1P10146 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC9.05□□□□□ -0.96
Ccl1P10146 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC9.05□□□□□ -0.96
Ccl1P10146 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC9.05□□□□□ -0.96
Ccl1P10146 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC9.05□□□□□ -0.96
Ccl1P10146 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC9.05□□□□□ -0.96
Ccl1P10146 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC9.05□□□□□ -0.96
Ccl1P10146 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC9.05□□□□□ -0.96
Ccl1P10146 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
Ccl1P10146 Gm5706-201ENSMUST00000181525 993 ntBASIC9.05□□□□□ -0.96
Ccl1P10146 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC9.05□□□□□ -0.96
Ccl1P10146 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC9.05□□□□□ -0.96
Ccl1P10146 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC9.05□□□□□ -0.96
Ccl1P10146 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC9.05□□□□□ -0.96
Ccl1P10146 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC9.05□□□□□ -0.96
Ccl1P10146 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC9.05□□□□□ -0.96
Ccl1P10146 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC9.05□□□□□ -0.96
Ccl1P10146 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Ccl1P10146 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC9.05□□□□□ -0.96
Ccl1P10146 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Ccl1P10146 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 Spata33-207ENSMUST00000212760 4074 ntBASIC9.05□□□□□ -0.96
Ccl1P10146 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Ccl1P10146 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Ccl1P10146 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ccl1P10146 Gm37954-201ENSMUST00000195400 2071 ntBASIC9.04□□□□□ -0.96
Ccl1P10146 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ccl1P10146 Gria1-201ENSMUST00000036315 5546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ccl1P10146 Gm37600-201ENSMUST00000193764 3292 ntBASIC9.04□□□□□ -0.96
Ccl1P10146 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Ccl1P10146 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Ccl1P10146 Gm37131-201ENSMUST00000192502 1561 ntBASIC9.04□□□□□ -0.96
Ccl1P10146 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ccl1P10146 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ccl1P10146 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ccl1P10146 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ccl1P10146 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ccl1P10146 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ccl1P10146 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC9.04□□□□□ -0.96
Ccl1P10146 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ccl1P10146 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Ccl1P10146 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Ccl1P10146 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ccl1P10146 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ccl1P10146 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Ccl1P10146 Gm15610-201ENSMUST00000120584 195 ntBASIC9.04□□□□□ -0.96
Ccl1P10146 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC9.04□□□□□ -0.96
Ccl1P10146 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC9.04□□□□□ -0.96
Ccl1P10146 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC9.04□□□□□ -0.96
Ccl1P10146 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC9.04□□□□□ -0.96
Ccl1P10146 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC9.04□□□□□ -0.96
Ccl1P10146 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Ccl1P10146 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC9.04□□□□□ -0.96
Ccl1P10146 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Ccl1P10146 Gm7287-201ENSMUST00000205267 602 ntBASIC9.04□□□□□ -0.96
Ccl1P10146 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC9.04□□□□□ -0.96
Ccl1P10146 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ccl1P10146 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC9.04□□□□□ -0.96
Ccl1P10146 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ccl1P10146 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Ccl1P10146 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC9.04□□□□□ -0.96
Ccl1P10146 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ccl1P10146 Gm38089-201ENSMUST00000193585 1514 ntBASIC9.04□□□□□ -0.96
Ccl1P10146 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ccl1P10146 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms