Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
UbbP0CG49 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
UbbP0CG49 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
UbbP0CG49 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
UbbP0CG49 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
UbbP0CG49 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
UbbP0CG49 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.21□□□□□ -0.78
UbbP0CG49 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.21□□□□□ -0.78
UbbP0CG49 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
UbbP0CG49 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
UbbP0CG49 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
UbbP0CG49 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
UbbP0CG49 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.21□□□□□ -0.78
UbbP0CG49 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
UbbP0CG49 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.21□□□□□ -0.78
UbbP0CG49 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.21□□□□□ -0.78
UbbP0CG49 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
UbbP0CG49 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
UbbP0CG49 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
UbbP0CG49 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
UbbP0CG49 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
UbbP0CG49 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
UbbP0CG49 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.21□□□□□ -0.78
UbbP0CG49 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
UbbP0CG49 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
UbbP0CG49 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
UbbP0CG49 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
UbbP0CG49 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
UbbP0CG49 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
UbbP0CG49 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.21□□□□□ -0.78
UbbP0CG49 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
UbbP0CG49 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UbbP0CG49 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
UbbP0CG49 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
UbbP0CG49 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
UbbP0CG49 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
UbbP0CG49 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
UbbP0CG49 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UbbP0CG49 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UbbP0CG49 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
UbbP0CG49 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UbbP0CG49 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
UbbP0CG49 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
UbbP0CG49 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
UbbP0CG49 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
UbbP0CG49 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UbbP0CG49 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC10.2□□□□□ -0.78
UbbP0CG49 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
UbbP0CG49 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UbbP0CG49 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UbbP0CG49 Gm6023-201ENSMUST00000118217 606 ntBASIC10.2□□□□□ -0.78
UbbP0CG49 Gm5419-201ENSMUST00000119301 527 ntBASIC10.2□□□□□ -0.78
UbbP0CG49 Gm15163-201ENSMUST00000120749 1302 ntBASIC10.2□□□□□ -0.78
UbbP0CG49 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
UbbP0CG49 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.2□□□□□ -0.78
UbbP0CG49 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.2□□□□□ -0.78
UbbP0CG49 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
UbbP0CG49 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UbbP0CG49 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
UbbP0CG49 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
UbbP0CG49 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.2□□□□□ -0.78
UbbP0CG49 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
UbbP0CG49 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
UbbP0CG49 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.2□□□□□ -0.78
UbbP0CG49 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UbbP0CG49 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.2□□□□□ -0.78
UbbP0CG49 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.2□□□□□ -0.78
UbbP0CG49 Gm19994-201ENSMUST00000217086 586 ntBASIC10.2□□□□□ -0.78
UbbP0CG49 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
UbbP0CG49 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.2□□□□□ -0.78
UbbP0CG49 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
UbbP0CG49 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UbbP0CG49 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UbbP0CG49 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UbbP0CG49 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
UbbP0CG49 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UbbP0CG49 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UbbP0CG49 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.2□□□□□ -0.78
UbbP0CG49 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UbbP0CG49 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UbbP0CG49 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
UbbP0CG49 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.2□□□□□ -0.78
UbbP0CG49 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
UbbP0CG49 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
UbbP0CG49 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UbbP0CG49 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
UbbP0CG49 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UbbP0CG49 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
UbbP0CG49 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
UbbP0CG49 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
UbbP0CG49 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
UbbP0CG49 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
UbbP0CG49 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
UbbP0CG49 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
UbbP0CG49 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
UbbP0CG49 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
UbbP0CG49 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
UbbP0CG49 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
UbbP0CG49 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
UbbP0CG49 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms