Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Hoxb3P09026 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxb3P09026 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxb3P09026 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxb3P09026 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxb3P09026 Mir705-201ENSMUST00000102058 82 ntBASIC11.91□□□□□ -0.5
Hoxb3P09026 Gm26286-201ENSMUST00000104166 134 ntBASIC11.91□□□□□ -0.5
Hoxb3P09026 Gm23912-201ENSMUST00000104687 87 ntBASIC11.91□□□□□ -0.5
Hoxb3P09026 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxb3P09026 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Hoxb3P09026 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC11.91□□□□□ -0.5
Hoxb3P09026 Gm13744-201ENSMUST00000118953 850 ntBASIC11.91□□□□□ -0.5
Hoxb3P09026 Gm11544-201ENSMUST00000120215 382 ntBASIC11.91□□□□□ -0.5
Hoxb3P09026 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC11.91□□□□□ -0.5
Hoxb3P09026 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC11.91□□□□□ -0.5
Hoxb3P09026 Gm8723-201ENSMUST00000166076 820 ntBASIC11.91□□□□□ -0.5
Hoxb3P09026 Gm8701-201ENSMUST00000169259 874 ntBASIC11.91□□□□□ -0.5
Hoxb3P09026 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
Hoxb3P09026 Gm3650-201ENSMUST00000180600 747 ntBASIC11.91□□□□□ -0.5
Hoxb3P09026 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxb3P09026 Gm7069-201ENSMUST00000182418 1008 ntBASIC11.91□□□□□ -0.5
Hoxb3P09026 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxb3P09026 Gm18801-201ENSMUST00000186616 536 ntBASIC11.91□□□□□ -0.5
Hoxb3P09026 Gm29018-201ENSMUST00000188707 925 ntTSL 3 BASIC11.91□□□□□ -0.5
Hoxb3P09026 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.91□□□□□ -0.5
Hoxb3P09026 Gm9931-201ENSMUST00000193584 1185 ntBASIC11.91□□□□□ -0.5
Hoxb3P09026 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC11.91□□□□□ -0.5
Hoxb3P09026 Gm43184-201ENSMUST00000197247 542 ntBASIC11.91□□□□□ -0.5
Hoxb3P09026 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC11.91□□□□□ -0.5
Hoxb3P09026 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Hoxb3P09026 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Hoxb3P09026 Gm44980-201ENSMUST00000205826 314 ntBASIC11.91□□□□□ -0.5
Hoxb3P09026 Gm31135-202ENSMUST00000208946 1155 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxb3P09026 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxb3P09026 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC11.91□□□□□ -0.5
Hoxb3P09026 Gm2875-201ENSMUST00000211333 360 ntBASIC11.91□□□□□ -0.5
Hoxb3P09026 Gm3635-201ENSMUST00000212314 354 ntBASIC11.91□□□□□ -0.5
Hoxb3P09026 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC11.91□□□□□ -0.5
Hoxb3P09026 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC11.91□□□□□ -0.5
Hoxb3P09026 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC11.91□□□□□ -0.5
Hoxb3P09026 Gm807-202ENSMUST00000224929 408 ntBASIC11.91□□□□□ -0.5
Hoxb3P09026 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxb3P09026 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxb3P09026 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxb3P09026 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Hoxb3P09026 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Hoxb3P09026 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Hoxb3P09026 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxb3P09026 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC11.91□□□□□ -0.5
Hoxb3P09026 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Hoxb3P09026 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxb3P09026 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.91□□□□□ -0.5
Hoxb3P09026 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxb3P09026 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxb3P09026 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.91□□□□□ -0.5
Hoxb3P09026 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxb3P09026 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.91□□□□□ -0.5
Hoxb3P09026 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxb3P09026 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hoxb3P09026 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxb3P09026 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxb3P09026 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxb3P09026 Gm42995-201ENSMUST00000197047 1330 ntBASIC11.9□□□□□ -0.5
Hoxb3P09026 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxb3P09026 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxb3P09026 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxb3P09026 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxb3P09026 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxb3P09026 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxb3P09026 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxb3P09026 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Hoxb3P09026 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxb3P09026 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Hoxb3P09026 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxb3P09026 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Hoxb3P09026 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxb3P09026 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxb3P09026 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.9□□□□□ -0.5
Hoxb3P09026 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.9□□□□□ -0.5
Hoxb3P09026 Gm26013-201ENSMUST00000104404 119 ntBASIC11.9□□□□□ -0.5
Hoxb3P09026 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxb3P09026 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC11.9□□□□□ -0.5
Hoxb3P09026 Gm6461-201ENSMUST00000120015 633 ntBASIC11.9□□□□□ -0.5
Hoxb3P09026 Gm14247-201ENSMUST00000120950 237 ntBASIC11.9□□□□□ -0.5
Hoxb3P09026 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxb3P09026 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxb3P09026 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Hoxb3P09026 Gm3760-201ENSMUST00000167475 804 ntBASIC11.9□□□□□ -0.5
Hoxb3P09026 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Hoxb3P09026 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxb3P09026 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxb3P09026 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxb3P09026 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxb3P09026 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC11.9□□□□□ -0.5
Hoxb3P09026 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC11.9□□□□□ -0.5
Hoxb3P09026 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC11.9□□□□□ -0.5
Hoxb3P09026 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hoxb3P09026 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.9□□□□□ -0.5
Hoxb3P09026 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.9□□□□□ -0.5
Hoxb3P09026 Gm45594-201ENSMUST00000211717 241 ntBASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms