Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim1O70400 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Pdlim1O70400 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim1O70400 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim1O70400 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim1O70400 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim1O70400 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Pdlim1O70400 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Pdlim1O70400 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim1O70400 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Pdlim1O70400 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim1O70400 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim1O70400 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim1O70400 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.63□□□□□ -0.55
Pdlim1O70400 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim1O70400 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim1O70400 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim1O70400 Gm13461-201ENSMUST00000120980 662 ntBASIC11.63□□□□□ -0.55
Pdlim1O70400 Gm8199-201ENSMUST00000121323 823 ntBASIC11.63□□□□□ -0.55
Pdlim1O70400 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.63□□□□□ -0.55
Pdlim1O70400 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.63□□□□□ -0.55
Pdlim1O70400 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.63□□□□□ -0.55
Pdlim1O70400 Gm10807-201ENSMUST00000177134 795 ntBASIC11.63□□□□□ -0.55
Pdlim1O70400 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.63□□□□□ -0.55
Pdlim1O70400 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.63□□□□□ -0.55
Pdlim1O70400 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.63□□□□□ -0.55
Pdlim1O70400 Gm5369-201ENSMUST00000217499 588 ntBASIC11.63□□□□□ -0.55
Pdlim1O70400 Gm18065-201ENSMUST00000221395 526 ntBASIC11.63□□□□□ -0.55
Pdlim1O70400 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.63□□□□□ -0.55
Pdlim1O70400 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim1O70400 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Pdlim1O70400 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.63□□□□□ -0.55
Pdlim1O70400 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim1O70400 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Pdlim1O70400 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Pdlim1O70400 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim1O70400 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim1O70400 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim1O70400 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim1O70400 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim1O70400 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim1O70400 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim1O70400 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim1O70400 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim1O70400 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdlim1O70400 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim1O70400 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Pdlim1O70400 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Pdlim1O70400 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim1O70400 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim1O70400 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim1O70400 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim1O70400 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Pdlim1O70400 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim1O70400 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Pdlim1O70400 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim1O70400 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim1O70400 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim1O70400 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim1O70400 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim1O70400 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Pdlim1O70400 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim1O70400 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim1O70400 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim1O70400 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim1O70400 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim1O70400 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim1O70400 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim1O70400 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Pdlim1O70400 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.62□□□□□ -0.55
Pdlim1O70400 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pdlim1O70400 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.62□□□□□ -0.55
Pdlim1O70400 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.62□□□□□ -0.55
Pdlim1O70400 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.62□□□□□ -0.55
Pdlim1O70400 Gm27530-201ENSMUST00000184096 98 ntBASIC11.62□□□□□ -0.55
Pdlim1O70400 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.62□□□□□ -0.55
Pdlim1O70400 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.62□□□□□ -0.55
Pdlim1O70400 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.62□□□□□ -0.55
Pdlim1O70400 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.62□□□□□ -0.55
Pdlim1O70400 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim1O70400 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.62□□□□□ -0.55
Pdlim1O70400 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim1O70400 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pdlim1O70400 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.62□□□□□ -0.55
Pdlim1O70400 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim1O70400 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Pdlim1O70400 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Pdlim1O70400 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.62□□□□□ -0.55
Pdlim1O70400 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim1O70400 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Pdlim1O70400 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim1O70400 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim1O70400 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim1O70400 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim1O70400 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim1O70400 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim1O70400 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim1O70400 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdlim1O70400 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pdlim1O70400 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms