Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smarce1O54941 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Smarce1O54941 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.91□□□□□ -0.18
Smarce1O54941 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Smarce1O54941 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smarce1O54941 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.91□□□□□ -0.18
Smarce1O54941 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.91□□□□□ -0.18
Smarce1O54941 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.91□□□□□ -0.18
Smarce1O54941 Gzmn-202ENSMUST00000225535 989 ntBASIC13.91□□□□□ -0.18
Smarce1O54941 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.91□□□□□ -0.18
Smarce1O54941 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarce1O54941 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarce1O54941 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarce1O54941 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarce1O54941 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.91□□□□□ -0.18
Smarce1O54941 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarce1O54941 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Smarce1O54941 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarce1O54941 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smarce1O54941 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC13.91□□□□□ -0.18
Smarce1O54941 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smarce1O54941 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smarce1O54941 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Smarce1O54941 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Smarce1O54941 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smarce1O54941 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarce1O54941 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Smarce1O54941 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarce1O54941 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarce1O54941 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Smarce1O54941 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarce1O54941 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smarce1O54941 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarce1O54941 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarce1O54941 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarce1O54941 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC13.9□□□□□ -0.18
Smarce1O54941 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarce1O54941 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarce1O54941 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Smarce1O54941 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.9□□□□□ -0.18
Smarce1O54941 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.9□□□□□ -0.18
Smarce1O54941 Gm17420-201ENSMUST00000164753 153 ntBASIC13.9□□□□□ -0.18
Smarce1O54941 Gm6548-201ENSMUST00000167498 1165 ntBASIC13.9□□□□□ -0.18
Smarce1O54941 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarce1O54941 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarce1O54941 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC13.9□□□□□ -0.18
Smarce1O54941 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.9□□□□□ -0.18
Smarce1O54941 Gm43962-201ENSMUST00000203898 190 ntBASIC13.9□□□□□ -0.18
Smarce1O54941 Gm21769-201ENSMUST00000211922 111 ntBASIC13.9□□□□□ -0.18
Smarce1O54941 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarce1O54941 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarce1O54941 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarce1O54941 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarce1O54941 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarce1O54941 Gm10254-201ENSMUST00000052888 867 ntBASIC13.9□□□□□ -0.18
Smarce1O54941 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Smarce1O54941 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarce1O54941 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarce1O54941 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarce1O54941 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Smarce1O54941 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarce1O54941 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Smarce1O54941 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarce1O54941 Gm37969-201ENSMUST00000195777 3409 ntBASIC13.9□□□□□ -0.18
Smarce1O54941 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarce1O54941 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarce1O54941 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarce1O54941 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarce1O54941 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarce1O54941 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.9□□□□□ -0.19
Smarce1O54941 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Smarce1O54941 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
Smarce1O54941 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarce1O54941 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarce1O54941 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarce1O54941 Gm43931-201ENSMUST00000204817 2870 ntBASIC13.89□□□□□ -0.19
Smarce1O54941 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarce1O54941 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarce1O54941 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarce1O54941 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarce1O54941 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Smarce1O54941 Gm6560-201ENSMUST00000198588 1591 ntBASIC13.89□□□□□ -0.19
Smarce1O54941 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarce1O54941 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarce1O54941 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarce1O54941 Gm26286-201ENSMUST00000104166 134 ntBASIC13.89□□□□□ -0.19
Smarce1O54941 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smarce1O54941 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smarce1O54941 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarce1O54941 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smarce1O54941 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smarce1O54941 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smarce1O54941 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.89□□□□□ -0.19
Smarce1O54941 Gm32999-201ENSMUST00000192693 562 ntBASIC13.89□□□□□ -0.19
Smarce1O54941 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Smarce1O54941 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smarce1O54941 Gm18065-201ENSMUST00000221395 526 ntBASIC13.89□□□□□ -0.19
Smarce1O54941 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smarce1O54941 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Smarce1O54941 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms