Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Gm6108-201ENSMUST00000208365 367 ntBASIC12.44□□□□□ -0.42
Itgb3O54890 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Itgb3O54890 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.44□□□□□ -0.42
Itgb3O54890 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.44□□□□□ -0.42
Itgb3O54890 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.44□□□□□ -0.42
Itgb3O54890 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.44□□□□□ -0.42
Itgb3O54890 AC154680.1-201ENSMUST00000224376 859 ntBASIC12.44□□□□□ -0.42
Itgb3O54890 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.44□□□□□ -0.42
Itgb3O54890 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Itgb3O54890 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Itgb3O54890 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Itgb3O54890 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Itgb3O54890 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Itgb3O54890 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Itgb3O54890 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
Itgb3O54890 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Itgb3O54890 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Itgb3O54890 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Itgb3O54890 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Itgb3O54890 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Itgb3O54890 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Itgb3O54890 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Itgb3O54890 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Itgb3O54890 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Itgb3O54890 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Itgb3O54890 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Itgb3O54890 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Itgb3O54890 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.43□□□□□ -0.42
Itgb3O54890 Gm26047-201ENSMUST00000157308 113 ntBASIC12.43□□□□□ -0.42
Itgb3O54890 Gm24844-201ENSMUST00000158679 127 ntBASIC12.43□□□□□ -0.42
Itgb3O54890 Gm8459-201ENSMUST00000162504 760 ntBASIC12.43□□□□□ -0.42
Itgb3O54890 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Itgb3O54890 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.43□□□□□ -0.42
Itgb3O54890 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.43□□□□□ -0.42
Itgb3O54890 Gm26047-202ENSMUST00000198840 115 ntBASIC12.43□□□□□ -0.42
Itgb3O54890 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Itgb3O54890 Gm45770-201ENSMUST00000212105 616 ntBASIC12.43□□□□□ -0.42
Itgb3O54890 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.43□□□□□ -0.42
Itgb3O54890 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.43□□□□□ -0.42
Itgb3O54890 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.43□□□□□ -0.42
Itgb3O54890 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.43□□□□□ -0.42
Itgb3O54890 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.43□□□□□ -0.42
Itgb3O54890 AC154532.1-201ENSMUST00000227860 965 ntBASIC12.43□□□□□ -0.42
Itgb3O54890 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Itgb3O54890 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Itgb3O54890 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Itgb3O54890 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.43□□□□□ -0.42
Itgb3O54890 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Itgb3O54890 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Itgb3O54890 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Itgb3O54890 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Itgb3O54890 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Itgb3O54890 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Itgb3O54890 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Itgb3O54890 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Itgb3O54890 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Itgb3O54890 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Itgb3O54890 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Itgb3O54890 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Itgb3O54890 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Itgb3O54890 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Itgb3O54890 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Itgb3O54890 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Itgb3O54890 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Itgb3O54890 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.43□□□□□ -0.42
Itgb3O54890 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Itgb3O54890 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Itgb3O54890 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Itgb3O54890 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Itgb3O54890 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Itgb3O54890 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.42□□□□□ -0.42
Itgb3O54890 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Itgb3O54890 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Itgb3O54890 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Itgb3O54890 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Itgb3O54890 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.42□□□□□ -0.42
Itgb3O54890 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Itgb3O54890 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Itgb3O54890 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Itgb3O54890 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.42□□□□□ -0.42
Itgb3O54890 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Itgb3O54890 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Itgb3O54890 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Itgb3O54890 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Itgb3O54890 Gm15352-201ENSMUST00000118696 270 ntBASIC12.42□□□□□ -0.42
Itgb3O54890 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Itgb3O54890 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Itgb3O54890 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Itgb3O54890 Gm35960-201ENSMUST00000202712 767 ntBASIC12.42□□□□□ -0.42
Itgb3O54890 Gm43916-201ENSMUST00000205062 967 ntBASIC12.42□□□□□ -0.42
Itgb3O54890 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Itgb3O54890 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Itgb3O54890 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Itgb3O54890 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Itgb3O54890 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Itgb3O54890 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Itgb3O54890 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Itgb3O54890 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Itgb3O54890 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Itgb3O54890 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms