Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Npc1O35604 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npc1O35604 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npc1O35604 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Npc1O35604 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Npc1O35604 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.47□□□□□ -0.57
Npc1O35604 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.47□□□□□ -0.57
Npc1O35604 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.47□□□□□ -0.57
Npc1O35604 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Npc1O35604 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.47□□□□□ -0.57
Npc1O35604 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.47□□□□□ -0.57
Npc1O35604 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Npc1O35604 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Npc1O35604 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.47□□□□□ -0.57
Npc1O35604 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.47□□□□□ -0.57
Npc1O35604 Gm11331-201ENSMUST00000119764 288 ntBASIC11.47□□□□□ -0.57
Npc1O35604 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.47□□□□□ -0.57
Npc1O35604 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.47□□□□□ -0.57
Npc1O35604 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 Gm8815-201ENSMUST00000173809 620 ntBASIC11.47□□□□□ -0.57
Npc1O35604 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Npc1O35604 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.47□□□□□ -0.57
Npc1O35604 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.47□□□□□ -0.57
Npc1O35604 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.47□□□□□ -0.57
Npc1O35604 Gm5369-201ENSMUST00000217499 588 ntBASIC11.47□□□□□ -0.57
Npc1O35604 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.47□□□□□ -0.57
Npc1O35604 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.47□□□□□ -0.57
Npc1O35604 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.47□□□□□ -0.57
Npc1O35604 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.47□□□□□ -0.57
Npc1O35604 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Npc1O35604 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Npc1O35604 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.47□□□□□ -0.57
Npc1O35604 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.47□□□□□ -0.57
Npc1O35604 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.46□□□□□ -0.57
Npc1O35604 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Npc1O35604 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Npc1O35604 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Npc1O35604 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Npc1O35604 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Npc1O35604 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.46□□□□□ -0.57
Npc1O35604 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Npc1O35604 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Npc1O35604 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Npc1O35604 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.46□□□□□ -0.57
Npc1O35604 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Npc1O35604 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Npc1O35604 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Npc1O35604 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Npc1O35604 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Npc1O35604 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Npc1O35604 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Npc1O35604 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.46□□□□□ -0.57
Npc1O35604 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Npc1O35604 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Npc1O35604 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Npc1O35604 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Npc1O35604 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.46□□□□□ -0.57
Npc1O35604 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Npc1O35604 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Npc1O35604 Gm26047-201ENSMUST00000157308 113 ntBASIC11.46□□□□□ -0.57
Npc1O35604 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.46□□□□□ -0.57
Npc1O35604 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.46□□□□□ -0.57
Npc1O35604 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Npc1O35604 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.46□□□□□ -0.57
Npc1O35604 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Npc1O35604 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.46□□□□□ -0.57
Npc1O35604 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Npc1O35604 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms