Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Alx4O35137 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Alx4O35137 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Alx4O35137 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.47□□□□□ -0.73
Alx4O35137 Gm17150-201ENSMUST00000165577 381 ntBASIC10.47□□□□□ -0.73
Alx4O35137 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.47□□□□□ -0.73
Alx4O35137 Gm8602-201ENSMUST00000184045 607 ntBASIC10.47□□□□□ -0.73
Alx4O35137 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.47□□□□□ -0.73
Alx4O35137 Gm37008-201ENSMUST00000195712 319 ntBASIC10.47□□□□□ -0.73
Alx4O35137 Gm43966-201ENSMUST00000203301 612 ntBASIC10.47□□□□□ -0.73
Alx4O35137 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.47□□□□□ -0.73
Alx4O35137 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.47□□□□□ -0.73
Alx4O35137 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.47□□□□□ -0.73
Alx4O35137 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Alx4O35137 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Alx4O35137 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Alx4O35137 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Alx4O35137 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.47□□□□□ -0.73
Alx4O35137 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.47□□□□□ -0.73
Alx4O35137 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Alx4O35137 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.47□□□□□ -0.73
Alx4O35137 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Alx4O35137 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Alx4O35137 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.47□□□□□ -0.73
Alx4O35137 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.47□□□□□ -0.73
Alx4O35137 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Alx4O35137 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Alx4O35137 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Alx4O35137 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Alx4O35137 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Alx4O35137 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Alx4O35137 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Alx4O35137 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.46□□□□□ -0.73
Alx4O35137 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.46□□□□□ -0.73
Alx4O35137 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Alx4O35137 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Alx4O35137 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.73
Alx4O35137 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.46□□□□□ -0.73
Alx4O35137 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Alx4O35137 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Alx4O35137 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Alx4O35137 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Alx4O35137 Gm11989-201ENSMUST00000117240 672 ntBASIC10.46□□□□□ -0.73
Alx4O35137 Gm11531-201ENSMUST00000117614 555 ntBASIC10.46□□□□□ -0.73
Alx4O35137 Gm11362-201ENSMUST00000118838 850 ntBASIC10.46□□□□□ -0.73
Alx4O35137 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Alx4O35137 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Alx4O35137 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Alx4O35137 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Alx4O35137 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.46□□□□□ -0.73
Alx4O35137 Gm8835-201ENSMUST00000173096 1169 ntBASIC10.46□□□□□ -0.73
Alx4O35137 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC10.46□□□□□ -0.73
Alx4O35137 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.46□□□□□ -0.73
Alx4O35137 Gm8565-201ENSMUST00000183259 1014 ntBASIC10.46□□□□□ -0.73
Alx4O35137 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Alx4O35137 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Alx4O35137 Gm38158-201ENSMUST00000194617 339 ntBASIC10.46□□□□□ -0.73
Alx4O35137 Gm43118-201ENSMUST00000199149 775 ntBASIC10.46□□□□□ -0.73
Alx4O35137 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.46□□□□□ -0.73
Alx4O35137 AC154222.2-201ENSMUST00000225848 607 ntBASIC10.46□□□□□ -0.73
Alx4O35137 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Alx4O35137 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.46□□□□□ -0.73
Alx4O35137 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.46□□□□□ -0.73
Alx4O35137 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Alx4O35137 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.46□□□□□ -0.74
Alx4O35137 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Alx4O35137 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Alx4O35137 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Alx4O35137 Dctn4-202ENSMUST00000223590 1530 ntBASIC10.46□□□□□ -0.74
Alx4O35137 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Alx4O35137 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Alx4O35137 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.46□□□□□ -0.74
Alx4O35137 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Alx4O35137 Gm19178-201ENSMUST00000217524 1819 ntBASIC10.46□□□□□ -0.74
Alx4O35137 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Alx4O35137 Gm35850-202ENSMUST00000211705 2120 ntBASIC10.46□□□□□ -0.74
Alx4O35137 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Alx4O35137 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Alx4O35137 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Alx4O35137 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Alx4O35137 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Alx4O35137 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Alx4O35137 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Alx4O35137 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Alx4O35137 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Alx4O35137 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Alx4O35137 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Alx4O35137 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Alx4O35137 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Alx4O35137 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Alx4O35137 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Alx4O35137 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Alx4O35137 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.45□□□□□ -0.74
Alx4O35137 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms