Protein–RNA interactions for Protein: O08540

Msmb, Beta-microseminoprotein, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MsmbO08540 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
MsmbO08540 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Gm9034-201ENSMUST00000182071 1005 ntBASIC9.04□□□□□ -0.96
MsmbO08540 Gm19287-201ENSMUST00000203190 358 ntBASIC9.04□□□□□ -0.96
MsmbO08540 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC9.04□□□□□ -0.96
MsmbO08540 AC154680.1-201ENSMUST00000224376 859 ntBASIC9.04□□□□□ -0.96
MsmbO08540 Gm10288-201ENSMUST00000084614 537 ntBASIC9.04□□□□□ -0.96
MsmbO08540 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC9.04□□□□□ -0.96
MsmbO08540 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
MsmbO08540 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
MsmbO08540 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 AC093022.4-203ENSMUST00000228523 2657 ntBASIC9.04□□□□□ -0.96
MsmbO08540 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
MsmbO08540 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
MsmbO08540 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC9.03□□□□□ -0.96
MsmbO08540 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
MsmbO08540 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
MsmbO08540 CT573086.2-201ENSMUST00000227277 4992 ntBASIC9.03□□□□□ -0.96
MsmbO08540 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
MsmbO08540 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
MsmbO08540 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
MsmbO08540 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
MsmbO08540 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
MsmbO08540 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
MsmbO08540 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
MsmbO08540 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
MsmbO08540 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
MsmbO08540 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
MsmbO08540 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
MsmbO08540 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC9.03□□□□□ -0.96
MsmbO08540 Gm37269-201ENSMUST00000193906 1891 ntBASIC9.03□□□□□ -0.96
MsmbO08540 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
MsmbO08540 Mir680-2-201ENSMUST00000102163 110 ntBASIC9.03□□□□□ -0.96
MsmbO08540 Gm23251-201ENSMUST00000103773 110 ntBASIC9.03□□□□□ -0.96
MsmbO08540 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
MsmbO08540 Gm7851-201ENSMUST00000117574 323 ntBASIC9.03□□□□□ -0.96
MsmbO08540 Gm11663-201ENSMUST00000117888 290 ntBASIC9.03□□□□□ -0.96
MsmbO08540 Gm6506-201ENSMUST00000119775 1136 ntBASIC9.03□□□□□ -0.96
MsmbO08540 Gm12036-201ENSMUST00000120008 530 ntBASIC9.03□□□□□ -0.96
MsmbO08540 Gm8566-201ENSMUST00000120174 465 ntBASIC9.03□□□□□ -0.96
MsmbO08540 Gm11660-201ENSMUST00000120955 412 ntBASIC9.03□□□□□ -0.96
MsmbO08540 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
MsmbO08540 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
MsmbO08540 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC9.03□□□□□ -0.96
MsmbO08540 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC9.03□□□□□ -0.96
MsmbO08540 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC9.03□□□□□ -0.96
MsmbO08540 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
MsmbO08540 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC9.03□□□□□ -0.96
MsmbO08540 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
MsmbO08540 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC9.03□□□□□ -0.96
MsmbO08540 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC9.03□□□□□ -0.96
MsmbO08540 Gm5523-201ENSMUST00000180415 997 ntBASIC9.03□□□□□ -0.96
MsmbO08540 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
MsmbO08540 Gm44100-201ENSMUST00000204329 436 ntBASIC9.03□□□□□ -0.96
MsmbO08540 Gm45575-201ENSMUST00000210283 548 ntBASIC9.03□□□□□ -0.96
MsmbO08540 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC9.03□□□□□ -0.96
MsmbO08540 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
MsmbO08540 Gm1821-202ENSMUST00000227415 750 ntBASIC9.03□□□□□ -0.96
MsmbO08540 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
MsmbO08540 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
MsmbO08540 Gm9785-201ENSMUST00000062642 1006 ntBASIC9.03□□□□□ -0.96
MsmbO08540 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
MsmbO08540 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC9.03□□□□□ -0.96
MsmbO08540 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
MsmbO08540 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
MsmbO08540 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
MsmbO08540 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC9.03□□□□□ -0.96
MsmbO08540 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC9.03□□□□□ -0.96
MsmbO08540 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
MsmbO08540 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
MsmbO08540 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
MsmbO08540 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
MsmbO08540 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
MsmbO08540 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
MsmbO08540 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
MsmbO08540 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
MsmbO08540 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
MsmbO08540 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
MsmbO08540 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC9.02□□□□□ -0.96
MsmbO08540 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
MsmbO08540 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC9.02□□□□□ -0.96
MsmbO08540 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC9.02□□□□□ -0.96
MsmbO08540 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms