Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm9996-201ENSMUST00000070359 913 ntBASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Shisa8J3QNX5 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Gm44207-201ENSMUST00000204568 1424 ntBASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Gm14832-201ENSMUST00000121289 322 ntBASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Gm11960-201ENSMUST00000122068 925 ntBASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Shisa8J3QNX5 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Shisa8J3QNX5 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Gm12390-201ENSMUST00000117897 397 ntBASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Shisa8J3QNX5 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Gm2546-201ENSMUST00000182630 991 ntBASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Gm18893-201ENSMUST00000198416 943 ntBASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Snora73a-201ENSMUST00000082453 205 ntBASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Shisa8J3QNX5 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms