Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Gm37852-201ENSMUST00000193027 350 ntBASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Gm19640-201ENSMUST00000214849 464 ntBASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ccdc180J3QNE4 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc180J3QNE4 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc180J3QNE4 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc180J3QNE4 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc180J3QNE4 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc180J3QNE4 AC156031.2-201ENSMUST00000213107 3310 ntBASIC21.08■□□□□ 0.97
Ccdc180J3QNE4 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC21.08■□□□□ 0.97
Ccdc180J3QNE4 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc180J3QNE4 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC21.08■□□□□ 0.97
Ccdc180J3QNE4 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC21.08■□□□□ 0.97
Ccdc180J3QNE4 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc180J3QNE4 Gm6024-201ENSMUST00000117850 1558 ntBASIC21.08■□□□□ 0.97
Ccdc180J3QNE4 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Ccdc180J3QNE4 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
Ccdc180J3QNE4 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc180J3QNE4 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc180J3QNE4 Gm9916-201ENSMUST00000192943 1228 ntBASIC21.08■□□□□ 0.96
Ccdc180J3QNE4 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc180J3QNE4 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC21.08■□□□□ 0.96
Ccdc180J3QNE4 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc180J3QNE4 Gm26670-202ENSMUST00000226862 340 ntBASIC21.08■□□□□ 0.96
Ccdc180J3QNE4 CT025618.1-203ENSMUST00000227008 589 ntBASIC21.08■□□□□ 0.96
Ccdc180J3QNE4 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc180J3QNE4 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc180J3QNE4 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc180J3QNE4 Gm45416-201ENSMUST00000209713 2201 ntBASIC21.08■□□□□ 0.96
Ccdc180J3QNE4 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc180J3QNE4 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc180J3QNE4 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc180J3QNE4 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Ccdc180J3QNE4 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Ccdc180J3QNE4 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC21.07■□□□□ 0.96
Ccdc180J3QNE4 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc180J3QNE4 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc180J3QNE4 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc180J3QNE4 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc180J3QNE4 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc180J3QNE4 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc180J3QNE4 Gm11619-201ENSMUST00000117474 237 ntBASIC21.07■□□□□ 0.96
Ccdc180J3QNE4 Gm6423-201ENSMUST00000204315 934 ntBASIC21.07■□□□□ 0.96
Ccdc180J3QNE4 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC21.07■□□□□ 0.96
Ccdc180J3QNE4 Gm45085-201ENSMUST00000209100 441 ntBASIC21.07■□□□□ 0.96
Ccdc180J3QNE4 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc180J3QNE4 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc180J3QNE4 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc180J3QNE4 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc180J3QNE4 Gm9915-201ENSMUST00000066196 1383 ntBASIC21.07■□□□□ 0.96
Ccdc180J3QNE4 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
Ccdc180J3QNE4 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc180J3QNE4 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc180J3QNE4 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC21.07■□□□□ 0.96
Ccdc180J3QNE4 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Ccdc180J3QNE4 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc180J3QNE4 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ccdc180J3QNE4 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Ccdc180J3QNE4 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc180J3QNE4 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC21.06■□□□□ 0.96
Ccdc180J3QNE4 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc180J3QNE4 Gm15617-201ENSMUST00000118973 771 ntBASIC21.06■□□□□ 0.96
Ccdc180J3QNE4 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC21.06■□□□□ 0.96
Ccdc180J3QNE4 Gm27956-201ENSMUST00000175604 260 ntBASIC21.06■□□□□ 0.96
Ccdc180J3QNE4 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC21.06■□□□□ 0.96
Ccdc180J3QNE4 Gm44008-201ENSMUST00000204345 412 ntBASIC21.06■□□□□ 0.96
Ccdc180J3QNE4 Gm9487-201ENSMUST00000216600 472 ntBASIC21.06■□□□□ 0.96
Ccdc180J3QNE4 Capsl-202ENSMUST00000226688 739 ntBASIC21.06■□□□□ 0.96
Ccdc180J3QNE4 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc180J3QNE4 Gm37651-201ENSMUST00000194679 1494 ntBASIC21.06■□□□□ 0.96
Ccdc180J3QNE4 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc180J3QNE4 Gm37122-201ENSMUST00000195313 1567 ntBASIC21.06■□□□□ 0.96
Ccdc180J3QNE4 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc180J3QNE4 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc180J3QNE4 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc180J3QNE4 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc180J3QNE4 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc180J3QNE4 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc180J3QNE4 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Ccdc180J3QNE4 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc180J3QNE4 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Ccdc180J3QNE4 Gm19692-201ENSMUST00000203856 2084 ntBASIC21.06■□□□□ 0.96
Ccdc180J3QNE4 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc180J3QNE4 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Ccdc180J3QNE4 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc180J3QNE4 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ccdc180J3QNE4 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 Gm5257-201ENSMUST00000121823 790 ntBASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Ccdc180J3QNE4 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 588.4 ms