Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.15□□□□□ -0.14
NpcdF8VQB8 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.15□□□□□ -0.14
NpcdF8VQB8 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NpcdF8VQB8 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Gm11996-201ENSMUST00000117538 915 ntBASIC14.15□□□□□ -0.14
NpcdF8VQB8 Gm6322-201ENSMUST00000118789 1004 ntBASIC14.15□□□□□ -0.14
NpcdF8VQB8 Gm14213-201ENSMUST00000119778 768 ntBASIC14.15□□□□□ -0.14
NpcdF8VQB8 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Gm11942-201ENSMUST00000180255 345 ntBASIC14.15□□□□□ -0.14
NpcdF8VQB8 Gm38151-201ENSMUST00000195085 289 ntBASIC14.15□□□□□ -0.14
NpcdF8VQB8 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Gm34312-201ENSMUST00000204650 1092 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
NpcdF8VQB8 CT009527.1-201ENSMUST00000224205 339 ntBASIC14.15□□□□□ -0.14
NpcdF8VQB8 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NpcdF8VQB8 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NpcdF8VQB8 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Gm43807-201ENSMUST00000200678 1781 ntBASIC14.14□□□□□ -0.15
NpcdF8VQB8 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Gm5555-201ENSMUST00000120352 1111 ntBASIC14.14□□□□□ -0.15
NpcdF8VQB8 Gm13445-201ENSMUST00000121664 307 ntBASIC14.14□□□□□ -0.15
NpcdF8VQB8 Gm25677-201ENSMUST00000174983 72 ntBASIC14.14□□□□□ -0.15
NpcdF8VQB8 Gm25998-201ENSMUST00000175397 53 ntBASIC14.14□□□□□ -0.15
NpcdF8VQB8 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Gm5599-201ENSMUST00000209602 788 ntBASIC14.14□□□□□ -0.15
NpcdF8VQB8 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Gm42840-201ENSMUST00000200303 2251 ntBASIC14.14□□□□□ -0.15
NpcdF8VQB8 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
NpcdF8VQB8 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.14□□□□□ -0.15
NpcdF8VQB8 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NpcdF8VQB8 AC129931.1-201ENSMUST00000228865 1861 ntBASIC14.14□□□□□ -0.15
NpcdF8VQB8 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NpcdF8VQB8 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NpcdF8VQB8 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
NpcdF8VQB8 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NpcdF8VQB8 Gm42706-201ENSMUST00000199733 1910 ntBASIC14.13□□□□□ -0.15
NpcdF8VQB8 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NpcdF8VQB8 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NpcdF8VQB8 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NpcdF8VQB8 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NpcdF8VQB8 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NpcdF8VQB8 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms