Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Colca2F8VPY8 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Colca2F8VPY8 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Colca2F8VPY8 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Colca2F8VPY8 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Colca2F8VPY8 Gm15625-201ENSMUST00000117617 1093 ntBASIC11.05□□□□□ -0.64
Colca2F8VPY8 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.05□□□□□ -0.64
Colca2F8VPY8 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Colca2F8VPY8 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC11.05□□□□□ -0.64
Colca2F8VPY8 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Colca2F8VPY8 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC11.05□□□□□ -0.64
Colca2F8VPY8 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC11.05□□□□□ -0.64
Colca2F8VPY8 Gm9625-201ENSMUST00000180422 955 ntBASIC11.05□□□□□ -0.64
Colca2F8VPY8 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Colca2F8VPY8 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC11.05□□□□□ -0.64
Colca2F8VPY8 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.05□□□□□ -0.64
Colca2F8VPY8 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Colca2F8VPY8 Gm37452-201ENSMUST00000194416 1160 ntBASIC11.05□□□□□ -0.64
Colca2F8VPY8 Gm37197-201ENSMUST00000195607 401 ntBASIC11.05□□□□□ -0.64
Colca2F8VPY8 Gm38314-201ENSMUST00000195709 625 ntBASIC11.05□□□□□ -0.64
Colca2F8VPY8 Gm42511-201ENSMUST00000196160 234 ntBASIC11.05□□□□□ -0.64
Colca2F8VPY8 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC11.05□□□□□ -0.64
Colca2F8VPY8 Gm2448-201ENSMUST00000207080 559 ntBASIC11.05□□□□□ -0.64
Colca2F8VPY8 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.05□□□□□ -0.64
Colca2F8VPY8 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Colca2F8VPY8 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.05□□□□□ -0.64
Colca2F8VPY8 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Colca2F8VPY8 CT010480.2-201ENSMUST00000225424 737 ntBASIC11.05□□□□□ -0.64
Colca2F8VPY8 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Colca2F8VPY8 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Colca2F8VPY8 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Colca2F8VPY8 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Colca2F8VPY8 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Colca2F8VPY8 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Colca2F8VPY8 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.05□□□□□ -0.64
Colca2F8VPY8 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Colca2F8VPY8 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Colca2F8VPY8 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.05□□□□□ -0.64
Colca2F8VPY8 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Colca2F8VPY8 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Colca2F8VPY8 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Colca2F8VPY8 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Colca2F8VPY8 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Colca2F8VPY8 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Colca2F8VPY8 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Colca2F8VPY8 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Colca2F8VPY8 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Colca2F8VPY8 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Colca2F8VPY8 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Colca2F8VPY8 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.04□□□□□ -0.64
Colca2F8VPY8 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Colca2F8VPY8 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Colca2F8VPY8 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Colca2F8VPY8 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Colca2F8VPY8 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Colca2F8VPY8 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Colca2F8VPY8 Gm13094-201ENSMUST00000117930 409 ntBASIC11.04□□□□□ -0.64
Colca2F8VPY8 Gm11475-201ENSMUST00000118482 476 ntBASIC11.04□□□□□ -0.64
Colca2F8VPY8 Gng5-ps-201ENSMUST00000120931 205 ntBASIC11.04□□□□□ -0.64
Colca2F8VPY8 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC11.04□□□□□ -0.64
Colca2F8VPY8 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Colca2F8VPY8 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Colca2F8VPY8 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Colca2F8VPY8 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.04□□□□□ -0.64
Colca2F8VPY8 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.04□□□□□ -0.64
Colca2F8VPY8 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Colca2F8VPY8 Gm6331-201ENSMUST00000217890 450 ntBASIC11.04□□□□□ -0.64
Colca2F8VPY8 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Colca2F8VPY8 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Colca2F8VPY8 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Colca2F8VPY8 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Colca2F8VPY8 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Colca2F8VPY8 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.04□□□□□ -0.64
Colca2F8VPY8 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Colca2F8VPY8 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Colca2F8VPY8 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Colca2F8VPY8 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Colca2F8VPY8 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Colca2F8VPY8 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Colca2F8VPY8 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Colca2F8VPY8 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Colca2F8VPY8 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Colca2F8VPY8 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Colca2F8VPY8 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Colca2F8VPY8 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Colca2F8VPY8 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Colca2F8VPY8 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Colca2F8VPY8 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.03□□□□□ -0.64
Colca2F8VPY8 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.03□□□□□ -0.64
Colca2F8VPY8 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Colca2F8VPY8 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Colca2F8VPY8 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Colca2F8VPY8 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Colca2F8VPY8 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Colca2F8VPY8 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Colca2F8VPY8 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Colca2F8VPY8 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Colca2F8VPY8 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Colca2F8VPY8 Snord23-201ENSMUST00000116828 109 ntBASIC11.03□□□□□ -0.64
Colca2F8VPY8 Gm9166-201ENSMUST00000120293 561 ntBASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms