Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atf6F6VAN0 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atf6F6VAN0 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Atf6F6VAN0 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.07□□□□□ -0.48
Atf6F6VAN0 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Atf6F6VAN0 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atf6F6VAN0 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Atf6F6VAN0 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Atf6F6VAN0 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Atf6F6VAN0 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.07□□□□□ -0.48
Atf6F6VAN0 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atf6F6VAN0 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.06□□□□□ -0.48
Atf6F6VAN0 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.06□□□□□ -0.48
Atf6F6VAN0 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf6F6VAN0 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Atf6F6VAN0 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf6F6VAN0 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf6F6VAN0 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Atf6F6VAN0 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atf6F6VAN0 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf6F6VAN0 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf6F6VAN0 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf6F6VAN0 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
Atf6F6VAN0 Gm14130-201ENSMUST00000118417 987 ntBASIC12.06□□□□□ -0.48
Atf6F6VAN0 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.06□□□□□ -0.48
Atf6F6VAN0 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atf6F6VAN0 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Atf6F6VAN0 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.06□□□□□ -0.48
Atf6F6VAN0 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf6F6VAN0 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.06□□□□□ -0.48
Atf6F6VAN0 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Atf6F6VAN0 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.06□□□□□ -0.48
Atf6F6VAN0 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf6F6VAN0 Gm45433-201ENSMUST00000209386 247 ntBASIC12.06□□□□□ -0.48
Atf6F6VAN0 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.06□□□□□ -0.48
Atf6F6VAN0 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf6F6VAN0 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf6F6VAN0 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.06□□□□□ -0.48
Atf6F6VAN0 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf6F6VAN0 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf6F6VAN0 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atf6F6VAN0 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.06□□□□□ -0.48
Atf6F6VAN0 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.06□□□□□ -0.48
Atf6F6VAN0 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atf6F6VAN0 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf6F6VAN0 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf6F6VAN0 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf6F6VAN0 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.06□□□□□ -0.48
Atf6F6VAN0 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Atf6F6VAN0 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Atf6F6VAN0 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atf6F6VAN0 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Atf6F6VAN0 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.05□□□□□ -0.48
Atf6F6VAN0 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Gm11509-201ENSMUST00000117358 325 ntBASIC12.05□□□□□ -0.48
Atf6F6VAN0 Gm24749-201ENSMUST00000157838 343 ntBASIC12.05□□□□□ -0.48
Atf6F6VAN0 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Gm37666-201ENSMUST00000194110 866 ntBASIC12.05□□□□□ -0.48
Atf6F6VAN0 Gm43184-201ENSMUST00000197247 542 ntBASIC12.05□□□□□ -0.48
Atf6F6VAN0 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.05□□□□□ -0.48
Atf6F6VAN0 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atf6F6VAN0 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Atf6F6VAN0 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Atf6F6VAN0 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms