Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syngap1F6SEU4 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Syngap1F6SEU4 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Syngap1F6SEU4 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Syngap1F6SEU4 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Syngap1F6SEU4 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Gm11663-201ENSMUST00000117888 290 ntBASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Gm12712-201ENSMUST00000120676 801 ntBASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Gm44421-201ENSMUST00000205064 1221 ntBASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.23□□□□□ -0.29
Syngap1F6SEU4 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Gm6903-201ENSMUST00000160509 1366 ntBASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Gm22846-201ENSMUST00000157706 270 ntBASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Gm43186-201ENSMUST00000198130 824 ntBASIC13.22□□□□□ -0.29
Syngap1F6SEU4 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 AC136376.2-201ENSMUST00000228819 490 ntBASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.22□□□□□ -0.29
Syngap1F6SEU4 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Syngap1F6SEU4 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
Syngap1F6SEU4 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Syngap1F6SEU4 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syngap1F6SEU4 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC13.21□□□□□ -0.29
Syngap1F6SEU4 Gm6831-202ENSMUST00000213025 1673 ntBASIC13.21□□□□□ -0.29
Syngap1F6SEU4 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syngap1F6SEU4 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syngap1F6SEU4 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syngap1F6SEU4 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Syngap1F6SEU4 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Syngap1F6SEU4 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Syngap1F6SEU4 Gm11578-201ENSMUST00000118530 459 ntBASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms