Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.24□□□□□ -0.45
Scn1aA2APX8 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.24□□□□□ -0.45
Scn1aA2APX8 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1aA2APX8 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Scn1aA2APX8 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Scn1aA2APX8 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1aA2APX8 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1aA2APX8 Pck2-205ENSMUST00000226352 2784 ntBASIC12.23□□□□□ -0.45
Scn1aA2APX8 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1aA2APX8 Gm37299-201ENSMUST00000193951 826 ntBASIC12.23□□□□□ -0.45
Scn1aA2APX8 Gm45856-201ENSMUST00000212752 416 ntBASIC12.23□□□□□ -0.45
Scn1aA2APX8 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Scn1aA2APX8 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Scn1aA2APX8 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1aA2APX8 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1aA2APX8 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1aA2APX8 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1aA2APX8 Gm28424-201ENSMUST00000187393 1319 ntBASIC12.23□□□□□ -0.45
Scn1aA2APX8 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.23□□□□□ -0.45
Scn1aA2APX8 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1aA2APX8 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1aA2APX8 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Scn1aA2APX8 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.23□□□□□ -0.45
Scn1aA2APX8 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1aA2APX8 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.23□□□□□ -0.45
Scn1aA2APX8 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1aA2APX8 Mir7076-201ENSMUST00000183519 74 ntBASIC12.23□□□□□ -0.45
Scn1aA2APX8 Gm28388-201ENSMUST00000186262 437 ntBASIC12.23□□□□□ -0.45
Scn1aA2APX8 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.23□□□□□ -0.45
Scn1aA2APX8 Gm9132-201ENSMUST00000210182 832 ntBASIC12.23□□□□□ -0.45
Scn1aA2APX8 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1aA2APX8 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.23□□□□□ -0.45
Scn1aA2APX8 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.23□□□□□ -0.45
Scn1aA2APX8 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.23□□□□□ -0.45
Scn1aA2APX8 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1aA2APX8 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Scn1aA2APX8 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1aA2APX8 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1aA2APX8 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.23□□□□□ -0.45
Scn1aA2APX8 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1aA2APX8 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1aA2APX8 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Scn1aA2APX8 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Scn1aA2APX8 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Scn1aA2APX8 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1aA2APX8 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1aA2APX8 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1aA2APX8 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1aA2APX8 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1aA2APX8 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Scn1aA2APX8 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Scn1aA2APX8 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1aA2APX8 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Scn1aA2APX8 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Scn1aA2APX8 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1aA2APX8 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Scn1aA2APX8 Gm11500-201ENSMUST00000118237 601 ntBASIC12.22□□□□□ -0.45
Scn1aA2APX8 Gm13888-201ENSMUST00000119148 422 ntBASIC12.22□□□□□ -0.45
Scn1aA2APX8 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.22□□□□□ -0.45
Scn1aA2APX8 Gm24514-201ENSMUST00000174961 285 ntBASIC12.22□□□□□ -0.45
Scn1aA2APX8 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Scn1aA2APX8 Gm9645-201ENSMUST00000197131 792 ntBASIC12.22□□□□□ -0.45
Scn1aA2APX8 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.22□□□□□ -0.45
Scn1aA2APX8 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC12.22□□□□□ -0.45
Scn1aA2APX8 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.22□□□□□ -0.45
Scn1aA2APX8 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.22□□□□□ -0.45
Scn1aA2APX8 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Scn1aA2APX8 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1aA2APX8 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1aA2APX8 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1aA2APX8 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1aA2APX8 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.22□□□□□ -0.45
Scn1aA2APX8 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1aA2APX8 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1aA2APX8 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1aA2APX8 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1aA2APX8 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1aA2APX8 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1aA2APX8 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Scn1aA2APX8 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.22□□□□□ -0.45
Scn1aA2APX8 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC12.21□□□□□ -0.45
Scn1aA2APX8 Mir7032-201ENSMUST00000185154 79 ntBASIC12.21□□□□□ -0.45
Scn1aA2APX8 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.21□□□□□ -0.45
Scn1aA2APX8 Gm44158-201ENSMUST00000203881 505 ntBASIC12.21□□□□□ -0.45
Scn1aA2APX8 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.21□□□□□ -0.45
Scn1aA2APX8 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.21□□□□□ -0.45
Scn1aA2APX8 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn1aA2APX8 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Scn1aA2APX8 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Scn1aA2APX8 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms