Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
H2afb3S4R1G7 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Gm12742-201ENSMUST00000117326 410 ntBASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Gm7722-201ENSMUST00000120646 741 ntBASIC10.59□□□□□ -0.71
H2afb3S4R1G7 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Gm3096-201ENSMUST00000185770 364 ntBASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Olfr284-202ENSMUST00000206647 966 ntBASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Gm18935-201ENSMUST00000212692 664 ntBASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Gm30285-201ENSMUST00000214614 422 ntBASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
H2afb3S4R1G7 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC10.58□□□□□ -0.71
H2afb3S4R1G7 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.71
H2afb3S4R1G7 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Gm14644-201ENSMUST00000116671 647 ntBASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Gm12957-201ENSMUST00000117835 377 ntBASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Gm14441-201ENSMUST00000121960 540 ntBASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Gm17420-201ENSMUST00000164753 153 ntBASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Gm6114-201ENSMUST00000182472 968 ntBASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 AY702102-202ENSMUST00000194651 1173 ntBASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
H2afb3S4R1G7 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms